BLASTX nr result

ID: Papaver22_contig00029030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029030
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262798.2| PREDICTED: transcription initiation factor I...    62   4e-08
emb|CBI33123.3| unnamed protein product [Vitis vinifera]               62   4e-08
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]    60   3e-07
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...    58   8e-07
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...    57   1e-06

>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = -1

Query: 527 ESKTSKDGSAAASESITESPKPSRRSLSPAEITSTPSANQLFITKDQIKAALLQQAIVTA 348
           ESK+S      +   +T +PK +  S    +  ST SA    +T+D+I+A LLQ+A VT 
Sbjct: 435 ESKSSAKDEGPSPSKVTATPKGTPSS--SVKTGSTSSAGP--VTEDEIRAVLLQKAPVTT 490

Query: 347 HDLVRKLRSRQKTREDRLAFSGFVRGICKVQIEEYGSRYVV 225
            DLV K ++R K++ED+ AF+  +R I K+Q +  G  YVV
Sbjct: 491 QDLVAKFKARLKSQEDKKAFADILRRISKIQ-KTNGPNYVV 530


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = -1

Query: 527 ESKTSKDGSAAASESITESPKPSRRSLSPAEITSTPSANQLFITKDQIKAALLQQAIVTA 348
           ESK+S      +   +T +PK +  S    +  ST SA    +T+D+I+A LLQ+A VT 
Sbjct: 440 ESKSSAKDEGPSPSKVTATPKGTPSS--SVKTGSTSSAGP--VTEDEIRAVLLQKAPVTT 495

Query: 347 HDLVRKLRSRQKTREDRLAFSGFVRGICKVQIEEYGSRYVV 225
            DLV K ++R K++ED+ AF+  +R I K+Q +  G  YVV
Sbjct: 496 QDLVAKFKARLKSQEDKKAFADILRRISKIQ-KTNGPNYVV 535


>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
 Frame = -1

Query: 530 RESKTSKDGSAAASESITESPKPSRRSL-------SPAEITSTPSANQLFITKDQIKAAL 372
           ++ KT  +  ++A +   E P PS+ +        S  +  ST SA    +T+D+I+A L
Sbjct: 329 KKVKTENESKSSAKD---EGPSPSKVTATAKGTPSSSVKTGSTSSAGP--VTEDEIRAVL 383

Query: 371 LQQAIVTAHDLVRKLRSRQKTREDRLAFSGFVRGICKVQIEEYGSRYVV 225
           LQ+A VT  DLV K ++R K++ED+ AF+  +R I K+Q +  G  YVV
Sbjct: 384 LQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQ-KTNGPNYVV 431


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 34/102 (33%), Positives = 59/102 (57%)
 Frame = -1

Query: 530 RESKTSKDGSAAASESITESPKPSRRSLSPAEITSTPSANQLFITKDQIKAALLQQAIVT 351
           ++ KT  + S A  E +  S   + +  +PA + + PS++   +T+++I+A L Q+  VT
Sbjct: 433 KKMKTETE-SKATDEGVPTSKSTASKG-APASVKTEPSSHSGPVTEEEIRAVLRQRTPVT 490

Query: 350 AHDLVRKLRSRQKTREDRLAFSGFVRGICKVQIEEYGSRYVV 225
             DLV K ++R +T ED+ AF+  +R I ++Q    G  YVV
Sbjct: 491 TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVV 532


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
           gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 584

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/98 (40%), Positives = 55/98 (56%)
 Frame = -1

Query: 518 TSKDGSAAASESITESPKPSRRSLSPAEITSTPSANQLFITKDQIKAALLQQAIVTAHDL 339
           TSK  S+A       +PK +  SL     +ST      F+T ++IKA LLQ   VT  DL
Sbjct: 496 TSKSKSSA-------NPKGAAASLRTESTSSTG-----FVTDEEIKAVLLQNGPVTTQDL 543

Query: 338 VRKLRSRQKTREDRLAFSGFVRGICKVQIEEYGSRYVV 225
           V K +SR KTRED+ AF+  ++ I ++Q +  G  YVV
Sbjct: 544 VAKFKSRLKTREDKEAFTHTLKRISRIQ-KTSGGSYVV 580


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