BLASTX nr result

ID: Papaver22_contig00029013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029013
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...    92   6e-17
emb|CBI16571.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    79   4e-13
gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]             79   4e-13
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    79   6e-13

>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 73/198 (36%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
 Frame = +2

Query: 8    SIKKLSFSSHSFNSKEQFR---SAMKNVEPETARRRRDSLDRSWASFEPPKTTVKRLVLQ 178
            S+K    SS S N  +  R   SA+K+ EPET RRRRDSL +SWA+FEPPKT VKR+VL 
Sbjct: 926  SMKNFLVSSSSANKDQSRRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKTIVKRMVL- 984

Query: 179  EERHKVSATKSASVALKADLSAKDESKRSHA----------------NREMHSDPSKQLS 310
            EE+ KV   K +    K   S       + A                N+ +H   +KQ S
Sbjct: 985  EEQQKVGVNKPSFSVDKRQFSPHKLEGSAFAYSNNNTTPSAFLYPSRNKGIHEISAKQAS 1044

Query: 311  GSPQSS-FTCVDNFSGSAQS-TLKFPVMQMTKNSPTPSFSAVAFPSLSSCNPAQTNTKGT 484
             SP +S F   ++ SG +QS   + P       +   +FS+++ P  SS    Q+N   T
Sbjct: 1045 YSPSTSLFRWANDPSGPSQSFGSRSPTPHALPGNNLSAFSSLSAPQ-SSPVVDQSNAMET 1103

Query: 485  FGLTSDRSSAGMFRIPKS 538
              LT++RSS+G+  + KS
Sbjct: 1104 CNLTNERSSSGVTFVEKS 1121


>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 73/198 (36%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
 Frame = +2

Query: 8    SIKKLSFSSHSFNSKEQFR---SAMKNVEPETARRRRDSLDRSWASFEPPKTTVKRLVLQ 178
            S+K    SS S N  +  R   SA+K+ EPET RRRRDSL +SWA+FEPPKT VKR+VL 
Sbjct: 986  SMKNFLVSSSSANKDQSRRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKTIVKRMVL- 1044

Query: 179  EERHKVSATKSASVALKADLSAKDESKRSHA----------------NREMHSDPSKQLS 310
            EE+ KV   K +    K   S       + A                N+ +H   +KQ S
Sbjct: 1045 EEQQKVGVNKPSFSVDKRQFSPHKLEGSAFAYSNNNTTPSAFLYPSRNKGIHEISAKQAS 1104

Query: 311  GSPQSS-FTCVDNFSGSAQS-TLKFPVMQMTKNSPTPSFSAVAFPSLSSCNPAQTNTKGT 484
             SP +S F   ++ SG +QS   + P       +   +FS+++ P  SS    Q+N   T
Sbjct: 1105 YSPSTSLFRWANDPSGPSQSFGSRSPTPHALPGNNLSAFSSLSAPQ-SSPVVDQSNAMET 1163

Query: 485  FGLTSDRSSAGMFRIPKS 538
              LT++RSS+G+  + KS
Sbjct: 1164 CNLTNERSSSGVTFVEKS 1181


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
 Frame = +2

Query: 8    SIKKLSFSSHSFNSKEQFR----SAMKNVEPETARRRRDSLDRSWASFEPPKTTVKRLVL 175
            S K L  SS   +  +Q R    SAMKN +PETARRRR+SLDR+WA+FEPPKTTVKR++L
Sbjct: 962  SAKNLLLSSIPASINQQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVKRMLL 1021

Query: 176  QEERHKVSATKSASVALKADLSAKDESKRSHANREMHSDPSKQLSGSPQSSFTCVDNFSG 355
            QE++   +     +V  +   SA +   RS  + + H+ P    +     SF      + 
Sbjct: 1022 QEQQK--TGMNQQTVLSERLRSANNTQDRSLLHVKDHASPVVSSNKGIMESF---QQDTS 1076

Query: 356  SAQST--LKFPVMQMTKNSPTPSFSAVAFPSLSSCNPAQTNT 475
             AQST     P M  + +  T S  + + PS +      +NT
Sbjct: 1077 EAQSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNKSSNT 1118


>gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 1804

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
 Frame = +2

Query: 8    SIKKLSFSSHSFNSKEQFR----SAMKNVEPETARRRRDSLDRSWASFEPPKTTVKRLVL 175
            S K L  SS   +  +Q R    SAMKN +PETARRRR+SLDR+WA+FEPPKTTVKR++L
Sbjct: 967  SAKNLLLSSIPASINQQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVKRMLL 1026

Query: 176  QEERHKVSATKSASVALKADLSAKDESKRSHANREMHSDPSKQLSGSPQSSFTCVDNFSG 355
            QE++   +     +V  +   SA +   RS  + + H+ P    +     SF      + 
Sbjct: 1027 QEQQK--TGMNQQTVLSERLRSANNTQDRSLLHVKDHASPVVSSNKGIMESF---QQDTS 1081

Query: 356  SAQST--LKFPVMQMTKNSPTPSFSAVAFPSLSSCNPAQTNT 475
             AQST     P M  + +  T S  + + PS +      +NT
Sbjct: 1082 EAQSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNKSSNT 1123


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
 Frame = +2

Query: 29   SSHSFNSKEQFRSAMKNVEPETARRRRDSLDRSWASFEPPKTTVKRLVLQEERHKVSATK 208
            +S +  S+++  SAMKN +PETARRRR+SLDR+WA+FEPPKTTVKR++LQE++       
Sbjct: 976  ASINAQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVKRMLLQEQQ---KTGM 1032

Query: 209  SASVALKADL-SAKDESKRSHANREMHSDPSKQLSGSPQSSFTCVDNFSGSAQSTL--KF 379
            +  + L   L S  +  +RS    + H+ P    +     SF      +  AQSTL    
Sbjct: 1033 NQQIVLSERLRSVNNTQERSLLRLKNHASPVVSSNKGIMESF---QQDTSEAQSTLFKTR 1089

Query: 380  PVMQMTKNSPTPSFSAVAFPSLS-SCNPAQTNT 475
            P M  + +  T S  + + PS + S N + + T
Sbjct: 1090 PPMPQSNSPFTISPISASKPSFNWSGNKSSSTT 1122


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