BLASTX nr result

ID: Papaver22_contig00028387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028387
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...    50   2e-12
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...    49   5e-12
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    49   1e-11
ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex su...    49   1e-11
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...    48   1e-11

>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score = 50.4 bits (119), Expect(2) = 2e-12
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +1

Query: 208  ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQ 345
            ATEF+ISLLQTL   E  + +S+LHNLV+ LAK+ T PG  E LPQ
Sbjct: 1792 ATEFSISLLQTLVVEEPKV-ISELHNLVDALAKLATKPGCPESLPQ 1836



 Score = 46.2 bits (108), Expect(2) = 2e-12
 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 5    VILSDGEHKSNKDTTVDLLRSEL---QISRMHMAKLVDAGRNSTCTRVSI 145
            VI S+ E K NK+ TV L+RSEL       +HMAKL+D GRN   T  SI
Sbjct: 1748 VIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSI 1797


>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score = 48.5 bits (114), Expect(2) = 5e-12
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 5    VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145
            VI SD E K NKD TV L+RSE   L    +HMAKL+D GRN   T  SI
Sbjct: 1676 VIYSDEERKFNKDITVGLIRSELLNLAEYNVHMAKLIDGGRNKGATEFSI 1725



 Score = 47.0 bits (110), Expect(2) = 5e-12
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = +1

Query: 208  ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQ 345
            ATEF+ISL+Q L   ES + +S+LHNLV+ LAK+   PGS E L Q
Sbjct: 1720 ATEFSISLIQALVVEESKV-ISELHNLVDALAKLAAKPGSSESLQQ 1764


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 48.9 bits (115), Expect(2) = 1e-11
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 208  ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE 333
            ATEFAISLLQTL   ES + +S+LHNLV+ LAK+   PGS E
Sbjct: 1793 ATEFAISLLQTLVVDESSV-ISELHNLVDALAKVAAKPGSSE 1833



 Score = 45.4 bits (106), Expect(2) = 1e-11
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 5    VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145
            VI S+ E K NKD T+ L+RSE   L    +HMAKL+D GRN   T  +I
Sbjct: 1749 VIYSEEERKYNKDITLGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAI 1798


>ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
           sativus]
          Length = 634

 Score = 48.9 bits (115), Expect(2) = 1e-11
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE 333
           ATEFAISLLQTL   ES + +S+LHNLV+ LAK+   PGS E
Sbjct: 526 ATEFAISLLQTLVVDESSV-ISELHNLVDALAKVAAKPGSSE 566



 Score = 45.4 bits (106), Expect(2) = 1e-11
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 5   VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145
           VI S+ E K NKD T+ L+RSE   L    +HMAKL+D GRN   T  +I
Sbjct: 482 VIYSEEERKYNKDITLGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAI 531


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score = 48.1 bits (113), Expect(2) = 1e-11
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = +1

Query: 208  ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQRF*IS*SP 369
            AT+FA+SL+Q L   ES + +S+LHNLV+ LAK+   PGS E L Q   I+ +P
Sbjct: 1735 ATDFAVSLIQALIVEESSV-ISELHNLVDALAKLAAKPGSSESLQQLIEIARNP 1787



 Score = 45.8 bits (107), Expect(2) = 1e-11
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 5    VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145
            VI SD E K NKD T+ L+RSE   L    +HMAKL+D GRN   T  ++
Sbjct: 1691 VIYSDEERKFNKDITLGLMRSELLNLAEYNVHMAKLIDGGRNKVATDFAV 1740


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