BLASTX nr result
ID: Papaver22_contig00028387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00028387 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 50 2e-12 ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri... 49 5e-12 ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 49 1e-11 ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex su... 49 1e-11 ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2... 48 1e-11 >ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] Length = 2424 Score = 50.4 bits (119), Expect(2) = 2e-12 Identities = 28/46 (60%), Positives = 34/46 (73%) Frame = +1 Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQ 345 ATEF+ISLLQTL E + +S+LHNLV+ LAK+ T PG E LPQ Sbjct: 1792 ATEFSISLLQTLVVEEPKV-ISELHNLVDALAKLATKPGCPESLPQ 1836 Score = 46.2 bits (108), Expect(2) = 2e-12 Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 5 VILSDGEHKSNKDTTVDLLRSEL---QISRMHMAKLVDAGRNSTCTRVSI 145 VI S+ E K NK+ TV L+RSEL +HMAKL+D GRN T SI Sbjct: 1748 VIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSI 1797 >ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis] gi|223548824|gb|EEF50313.1| ccr4-not transcription complex, putative [Ricinus communis] Length = 2330 Score = 48.5 bits (114), Expect(2) = 5e-12 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 5 VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145 VI SD E K NKD TV L+RSE L +HMAKL+D GRN T SI Sbjct: 1676 VIYSDEERKFNKDITVGLIRSELLNLAEYNVHMAKLIDGGRNKGATEFSI 1725 Score = 47.0 bits (110), Expect(2) = 5e-12 Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = +1 Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQ 345 ATEF+ISL+Q L ES + +S+LHNLV+ LAK+ PGS E L Q Sbjct: 1720 ATEFSISLIQALVVEESKV-ISELHNLVDALAKLAAKPGSSESLQQ 1764 >ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus] Length = 2427 Score = 48.9 bits (115), Expect(2) = 1e-11 Identities = 27/42 (64%), Positives = 32/42 (76%) Frame = +1 Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE 333 ATEFAISLLQTL ES + +S+LHNLV+ LAK+ PGS E Sbjct: 1793 ATEFAISLLQTLVVDESSV-ISELHNLVDALAKVAAKPGSSE 1833 Score = 45.4 bits (106), Expect(2) = 1e-11 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 5 VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145 VI S+ E K NKD T+ L+RSE L +HMAKL+D GRN T +I Sbjct: 1749 VIYSEEERKYNKDITLGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAI 1798 >ref|XP_004155258.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus] Length = 634 Score = 48.9 bits (115), Expect(2) = 1e-11 Identities = 27/42 (64%), Positives = 32/42 (76%) Frame = +1 Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE 333 ATEFAISLLQTL ES + +S+LHNLV+ LAK+ PGS E Sbjct: 526 ATEFAISLLQTLVVDESSV-ISELHNLVDALAKVAAKPGSSE 566 Score = 45.4 bits (106), Expect(2) = 1e-11 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 5 VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145 VI S+ E K NKD T+ L+RSE L +HMAKL+D GRN T +I Sbjct: 482 VIYSEEERKYNKDITLGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAI 531 >ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1| predicted protein [Populus trichocarpa] Length = 1987 Score = 48.1 bits (113), Expect(2) = 1e-11 Identities = 27/54 (50%), Positives = 37/54 (68%) Frame = +1 Query: 208 ATEFAISLLQTLFTRES*IGVSDLHNLVEPLAKIGT*PGSLE*LPQRF*IS*SP 369 AT+FA+SL+Q L ES + +S+LHNLV+ LAK+ PGS E L Q I+ +P Sbjct: 1735 ATDFAVSLIQALIVEESSV-ISELHNLVDALAKLAAKPGSSESLQQLIEIARNP 1787 Score = 45.8 bits (107), Expect(2) = 1e-11 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Frame = +2 Query: 5 VILSDGEHKSNKDTTVDLLRSE---LQISRMHMAKLVDAGRNSTCTRVSI 145 VI SD E K NKD T+ L+RSE L +HMAKL+D GRN T ++ Sbjct: 1691 VIYSDEERKFNKDITLGLMRSELLNLAEYNVHMAKLIDGGRNKVATDFAV 1740