BLASTX nr result

ID: Papaver22_contig00028303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028303
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|...    58   1e-06
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    58   1e-06
ref|XP_003601050.1| F-box/kelch-repeat protein [Medicago truncat...    58   1e-06
ref|XP_003594085.1| F-box family protein, partial [Medicago trun...    58   1e-06
gb|AAF98190.1|AC000107_13 F17F8.20 [Arabidopsis thaliana]              57   2e-06

>ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|AES79300.1| F-box
           [Medicago truncatula]
          Length = 402

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/50 (52%), Positives = 39/50 (78%)
 Frame = +3

Query: 240 LVCEILSRLPVKSLMQCKCVCKRWRFLIEKDANFIDLHLARSTTRPCLSI 389
           ++ E+LS LPVKSLM+ KCVCK W+ +I  +++F++LHL RST  P L++
Sbjct: 26  IITELLSFLPVKSLMRMKCVCKSWKIII-SNSSFVELHLHRSTRNPQLTM 74


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = +3

Query: 204 ANINPDFGGEGMLVCEILSRLPVKSLMQCKCVCKRWRFLIEKDANFIDLHLARSTTRPCL 383
           +N+ P       ++ EILSRLPV+SLMQ KCVCK W  +I  D  FI +HL RS   P  
Sbjct: 86  SNLPPSETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTII-SDPKFIKMHLNRSARNPNF 144

Query: 384 SI 389
           S+
Sbjct: 145 SV 146


>ref|XP_003601050.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355490098|gb|AES71301.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 415

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +3

Query: 240 LVCEILSRLPVKSLMQCKCVCKRWRFLIEKDANFIDLHLARSTTRPCLSI 389
           L+ EILSRLPVK+LMQ KCVCK W+ LI  D  F   HL RS     L+I
Sbjct: 23  LIVEILSRLPVKTLMQFKCVCKSWKTLISDDPVFAKFHLHRSPRNTHLAI 72


>ref|XP_003594085.1| F-box family protein, partial [Medicago truncatula]
           gi|355483133|gb|AES64336.1| F-box family protein,
           partial [Medicago truncatula]
          Length = 595

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +3

Query: 240 LVCEILSRLPVKSLMQCKCVCKRWRFLIEKDANFIDLHLARSTTRPCLSITVQKP 404
           +V EILSRLPVKSLMQ K VCK W++LI  D+NF   H   STTR  L     KP
Sbjct: 112 IVAEILSRLPVKSLMQLKSVCKSWKYLI-SDSNFAKNHFRVSTTRHHLVSDKTKP 165


>gb|AAF98190.1|AC000107_13 F17F8.20 [Arabidopsis thaliana]
          Length = 708

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = +3

Query: 240 LVCEILSRLPVKSLMQCKCVCKRWRFLIEKDANFIDLHLARSTTRPCLSITVQKPFEY 413
           L+ EILSRLP KS+ +C+CV KRWR ++     F +L L RS  RP L I VQ+  E+
Sbjct: 9   LIYEILSRLPAKSVARCRCVSKRWRSILRHQV-FTELFLTRSNARPRLLIGVQQDGEW 65


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