BLASTX nr result

ID: Papaver22_contig00028201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028201
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16398.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   132   2e-29
ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana] gi...   128   4e-28

>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  150 bits (378), Expect = 1e-34
 Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
 Frame = +1

Query: 64  VLTNLKNPSLRSLLKPFLNPNISFIHTRL--PNKEKP-NWNTNHFFAHSNPLLSVLEQCK 234
           +L  ++  SLR + KP L P+   IHTR   P+KE P NWNTNH F  SNP LS+LE+CK
Sbjct: 3   ILFLIRLGSLRWIQKPSL-PSSRHIHTRALSPHKENPINWNTNHSFVLSNPFLSLLEKCK 61

Query: 235 TLDQLKQIQAQMIITGLILNGFASSRLIAFCAMSESGNLDYCHLILSKTYNTNLFSWNLA 414
           ++ QLKQIQ+QM++TGLI +GFASSRLIAFCA+SE  +LDYC  IL  T N N FSWN+A
Sbjct: 62  SISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVA 121

Query: 415 LRGYSESKNPEKAIFL 462
           +RG+ +S+NP +A+ L
Sbjct: 122 IRGFLDSENPREAVVL 137


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/124 (58%), Positives = 90/124 (72%), Gaps = 5/124 (4%)
 Frame = +1

Query: 106 KPFLNPNISFI----HTRLPNKEKP-NWNTNHFFAHSNPLLSVLEQCKTLDQLKQIQAQM 270
           KP LNP  S +    H+   +K  P +WNT H +  SNPLLS+LE CK+  QLKQIQAQM
Sbjct: 17  KPLLNPFFSCLSLHSHSFSTHKSNPTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQM 76

Query: 271 IITGLILNGFASSRLIAFCAMSESGNLDYCHLILSKTYNTNLFSWNLALRGYSESKNPEK 450
           I+TGLIL+GFASSRLI+FCA+SES NLDYC  IL+   N N+FSWN  +RG  ES+NP+K
Sbjct: 77  ILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQK 136

Query: 451 AIFL 462
            + L
Sbjct: 137 GLVL 140


>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/120 (57%), Positives = 88/120 (73%), Gaps = 3/120 (2%)
 Frame = +1

Query: 112 FLNPNISFIHTR-LPN-KEKP-NWNTNHFFAHSNPLLSVLEQCKTLDQLKQIQAQMIITG 282
           F  P I  +HTR LP+ K+KP NWN +H    SNPLLS+LE C ++ ++K+I AQMI TG
Sbjct: 22  FQIPFIFLLHTRSLPHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTG 81

Query: 283 LILNGFASSRLIAFCAMSESGNLDYCHLILSKTYNTNLFSWNLALRGYSESKNPEKAIFL 462
           LI +GFA SRL+AFCA+SE  NLDYC  IL+   N N+FSWN+A+RGY ES+NP  A+ L
Sbjct: 82  LISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLL 141


>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  132 bits (333), Expect = 2e-29
 Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
 Frame = +1

Query: 112 FLNPNISFIHTR-LPN-KEKP-NWNTNHFFAHSNPLLSVLEQCKTLDQLKQIQAQMIITG 282
           F  P I  +HTR LP+ K+KP NWN +H    SNPLLS+LE C ++ ++K+I AQMI TG
Sbjct: 22  FQIPFIFLLHTRSLPHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTG 81

Query: 283 LILNGFASSRLIAFCAMSESGNLDYCHLILSKTYNTNLFSWNLALRGYSESKNPEKAIFL 462
           LI +GFA SRL+AFCA+SE  NLDYC  IL+   N N FSWN+A+RGY ES+NP  A+ L
Sbjct: 82  LISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLL 141


>ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
           gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial; Flags: Precursor
           gi|4544450|gb|AAD22358.1| hypothetical protein
           [Arabidopsis thaliana] gi|18086349|gb|AAL57637.1|
           At2g22410/F14M13.19 [Arabidopsis thaliana]
           gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis
           thaliana] gi|330252206|gb|AEC07300.1| protein slow
           growth 1 [Arabidopsis thaliana]
          Length = 681

 Score =  128 bits (322), Expect = 4e-28
 Identities = 72/131 (54%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
 Frame = +1

Query: 100 LLKPFLNPNIS---FIHTR-----LPN-KEKP-NWNTNHFFAHSNPLLSVLEQCKTLDQL 249
           LL P L P ++   + H++     LP+ ++KP NWN+ H F   NPLLS+LE+CK L  L
Sbjct: 10  LLPPPLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHL 69

Query: 250 KQIQAQMIITGLILNGFASSRLIAFCAMSESGNLDYCHLILSKTYNTNLFSWNLALRGYS 429
           KQIQAQMII GLIL+ FASSRLIAFCA+SES  LDY   IL    N N+FSWN+ +RG+S
Sbjct: 70  KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129

Query: 430 ESKNPEKAIFL 462
           ES+NP+++  L
Sbjct: 130 ESENPKESFLL 140


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