BLASTX nr result

ID: Papaver22_contig00028139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028139
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]...    57   3e-06
ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
           gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 201

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
 Frame = -1

Query: 551 IIRDTYKSLYQIVLGRKIEYLQYEKAPEGWVKVSTDGSIQLPDPKKIQKQETDKKSCKKE 372
           +IR+ +K   ++V         ++K   GW+K++ DGS                      
Sbjct: 22  LIRNYHKQPVKVV---------WKKPQIGWIKLNFDGS---------------------- 50

Query: 371 EKNEARAGGAGLFRNSEAGFMFGYQIELKVPYLKVKGKTNGESEQATDSYKIEAIVAKRG 192
              E +A   G+FRN +A F+ GY                 ES     S   E    KRG
Sbjct: 51  RGREGQASIGGIFRNHKAEFLLGYS----------------ESIGEATSTMAEFAALKRG 94

Query: 191 LAYALRAGFKKVWLELDHEILAKIL--RGEIKPRRLHKLIMEIYILMMKLEDVMVTSIPG 18
           L   L  G+  +WLE D +I+  I+  RG ++  R +K +  I ++M +L + +++ +  
Sbjct: 95  LELVLENGWTDIWLEGDAKIIMDIISKRGRLRCERTNKHVNYINVVMPELSNCVLSHVYR 154

Query: 17  EGN 9
           EGN
Sbjct: 155 EGN 157


>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
 Frame = -1

Query: 560 QRQIIRDTYKSLYQIVLGRKIEYLQYEKAPEGWVKVSTDGSIQLPDPKKIQKQETDKKSC 381
           Q +I++   +S  + +  R I  + ++K   GW K++ DGS                  C
Sbjct: 11  QIRILQSPVRSFIRNLHRRPIP-VSWKKPQIGWTKLNFDGS------------------C 51

Query: 380 KKEEKNEARAGGAGLFRNSEAGFMFGYQIELKVPYLKVKGKTNGESEQATDSYKIEAIVA 201
           K       +A   G+FRN EA F+ GY                 E    T S   E    
Sbjct: 52  KG---TAGKASIGGVFRNHEAEFLLGY----------------AEPIGGTTSTIAELAAL 92

Query: 200 KRGLAYALRAGFKKVWLELDHEILAKIL--RGEIKPRRLHKLIMEIYILMMKLEDVMVTS 27
           +RGL   L  G+  VWLE D + L  I+  R +++ +   + +  I ++M +L++ +VT 
Sbjct: 93  RRGLELVLENGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHINLIMPELQNCVVTH 152

Query: 26  IPGEGN 9
           +  EGN
Sbjct: 153 VFREGN 158


Top