BLASTX nr result

ID: Papaver22_contig00027968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027968
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    68   9e-10
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    57   1e-06
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    57   2e-06
ref|XP_003616534.1| hypothetical protein MTR_5g081500 [Medicago ...    55   5e-06

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/124 (33%), Positives = 56/124 (45%)
 Frame = -2

Query: 374  NQKWIPHLTPTIQSVQSHQLPPTTKISDFIDPHSHSWNHTLIFNTFTTQMAQHITAIYLP 195
            N  WIP   P         + P+ K+   ID  S+ WN  L+   F  +    I+A+ + 
Sbjct: 720  NDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIG 779

Query: 194  RDHQKDKSIWPFSKHGNYTSKTGYIQFNTTPTNAQQNQIHNQLPVDYKAIRKLQCPPKIR 15
              + +D   W F+K GNYT K+GY        N     I   L      I K+QCPPK+R
Sbjct: 780  NPNMEDTLGWHFTKAGNYTVKSGY-HTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLR 838

Query: 14   LFLW 3
             FLW
Sbjct: 839  HFLW 842


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
 Frame = -2

Query: 389 PWITINQKWIPHLTPTIQSVQSHQLPPTTKISDFIDPHSHSWNHTLIFNTFTTQMAQHIT 210
           PW+  ++   P LTP     + H L     + + IDPH+ +W+  L+ + F  + A  I 
Sbjct: 248 PWLPRDESRKP-LTP-----RGHSL--VESVDELIDPHTGTWDEQLVSDLFWEEDAAVIL 299

Query: 209 AIYLPRDHQKDKSIWPFSKHGNYTSKTGY-----IQFNTTPTNAQQNQIHNQLPVDYKAI 45
           A+ + +  +   S W F K G ++ K+ Y     +  N+   N QQ      +   +K+I
Sbjct: 300 ALPIHQGRENFIS-WHFEKLGIFSVKSAYRVARKMVINSNTANGQQGSTSRGVDSVWKSI 358

Query: 44  RKLQCPPKIRLFLW 3
            +L+CP K++ FLW
Sbjct: 359 WRLKCPNKLKHFLW 372


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/124 (23%), Positives = 58/124 (46%)
 Frame = -2

Query: 374 NQKWIPHLTPTIQSVQSHQLPPTTKISDFIDPHSHSWNHTLIFNTFTTQMAQHITAIYLP 195
           +Q W+ +        + H +    ++++ +  ++  WN + I   F T  A+ I    L 
Sbjct: 111 HQLWLGNHEQLTPVTELHSMWSELRVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLL 170

Query: 194 RDHQKDKSIWPFSKHGNYTSKTGYIQFNTTPTNAQQNQIHNQLPVDYKAIRKLQCPPKIR 15
              Q+D + W F K GNY+ ++ Y       T   Q++++      + +I  L+ PPK++
Sbjct: 171 PSVQQDIATWRFEKDGNYSIRSAYCDILNNNTALNQHRVNG----SWNSIWNLKLPPKVK 226

Query: 14  LFLW 3
            F+W
Sbjct: 227 NFMW 230


>ref|XP_003616534.1| hypothetical protein MTR_5g081500 [Medicago truncatula]
           gi|355517869|gb|AES99492.1| hypothetical protein
           MTR_5g081500 [Medicago truncatula]
          Length = 357

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/100 (32%), Positives = 46/100 (46%)
 Frame = -2

Query: 302 KISDFIDPHSHSWNHTLIFNTFTTQMAQHITAIYLPRDHQKDKSIWPFSKHGNYTSKTGY 123
           K+ + I+P +  WN TLI N F     Q I    L     +DK  W   K+GNY+  + Y
Sbjct: 45  KVPNIIEPSTKVWNTTLISNMFNHNTTQLILNTPLQPLVHEDKLTWKAEKNGNYSVSSAY 104

Query: 122 IQFNTTPTNAQQNQIHNQLPVDYKAIRKLQCPPKIRLFLW 3
                       ++ H  +P  +   RKL+ PP IR F+W
Sbjct: 105 ----RICVTEIADKSHLHIPARWNLTRKLKVPPMIRNFVW 140


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