BLASTX nr result
ID: Papaver22_contig00027916
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00027916 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote... 69 6e-10 ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2... 59 9e-07 ref|XP_003572154.1| PREDICTED: double-stranded RNA-binding prote... 58 1e-06 ref|XP_002532469.1| double-stranded RNA binding protein, putativ... 57 3e-06 >ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis vinifera] gi|296087161|emb|CBI33535.3| unnamed protein product [Vitis vinifera] Length = 333 Score = 68.9 bits (167), Expect = 6e-10 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Frame = -2 Query: 180 RKDTLSYKSILNEYAVKMNHPVLAYTTTQAEPH-SFFISSLVFNGKTYTGPAARNKKDAE 4 R+DT+ KSILNE+AVKMN YTT Q E F+SSLVFNG TYTG A RNKK+AE Sbjct: 102 REDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAGRNKKEAE 161 Query: 3 R 1 + Sbjct: 162 Q 162 >ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1| predicted protein [Populus trichocarpa] Length = 452 Score = 58.5 bits (140), Expect = 9e-07 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Frame = -2 Query: 174 DTLSYKSILNEYAVKMNHPVLAYTTTQAEPH-SFFISSLVFNGKTYTGPAARNKKDAER 1 DT+ KSILNE+AVK+N Y T Q+ FIS+LVF+G +YTG A RNKK+AE+ Sbjct: 221 DTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTGDAGRNKKEAEQ 279 >ref|XP_003572154.1| PREDICTED: double-stranded RNA-binding protein 4-like [Brachypodium distachyon] Length = 281 Score = 57.8 bits (138), Expect = 1e-06 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%) Frame = -2 Query: 177 KDTLSYKSILNEYAVKMNHPVLAYTTTQAE---PHSFFISSLVFNGKTYTGPAARNKKDA 7 +D L KSILNE+AVK Y+ + + P S F+SS+VF+GKTYTG AA +KKDA Sbjct: 116 QDVLFCKSILNEFAVKTKATQPKYSVDRPQGVSPISLFVSSVVFDGKTYTGEAAVSKKDA 175 Query: 6 ER 1 E+ Sbjct: 176 EQ 177 >ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis] gi|223527827|gb|EEF29925.1| double-stranded RNA binding protein, putative [Ricinus communis] Length = 289 Score = 56.6 bits (135), Expect = 3e-06 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Frame = -2 Query: 177 KDTLSYKSILNEYAVKMNHPVLAYTTT-QAEPHSFFISSLVFNGKTYTGPAARNKKDAER 1 +DT++ KSILNEYAVKM + Y T Q F+SS VFNG TY G R KK+AE+ Sbjct: 96 EDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIFVSSSVFNGVTYNGDIGRTKKEAEQ 155