BLASTX nr result

ID: Papaver22_contig00027835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027835
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    58   7e-07
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    58   7e-07
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
 Frame = +1

Query: 7   NGALYWLNVE-EDEEELSLVAFDLAKEEFRIISSPPCFNIDKPDCYQLQVLGGCLSVLHQ 183
           NG L+W++    ++    LV+FDL  E+FR +  P C  +++ D Y L VL GCLSV   
Sbjct: 237 NGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCD-YHLAVLRGCLSVAVY 295

Query: 184 RRGEYVDIWSWKKTNNNSSQIEGSWSWSREFRI-----------------VWENKST--E 306
                ++IW  K+ N          SW +E+ I                 +W+N S    
Sbjct: 296 CNYGRLEIWVMKEYNVKE-------SWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRA 348

Query: 307 YQPFALTKRGQVLLWY-NRTISLYDANGTSTELMDGDQLGF-KDFQAIPH 450
            +   + K G++LL Y NR +  YD      +  D D  G  K FQ + H
Sbjct: 349 VRALCVLKNGEILLEYKNRALVSYDPK--KGKFKDIDLQGTPKWFQTVVH 396


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
 Frame = +1

Query: 7   NGALYWLNVEEDEEELSLVAFDLAKEEFRIISSPPCFNIDKPDCYQLQVLGGCLSVLHQR 186
           NG L+W+          +V+FDLA E+FR I  P C  + + + Y L VLGGCLS    R
Sbjct: 238 NGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCN-YHLLVLGGCLSAAVHR 296

Query: 187 RGEYVDIWSWKKTNNNSSQIEGSWSWSREFRI-----------------VWEN--KSTEY 309
               +++W  K       + +   SW +EF I                 +W N  K    
Sbjct: 297 SNGKLEVWVMK-------EYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGV 349

Query: 310 QPFALTKRGQVLLWY 354
           +   L K G++LL Y
Sbjct: 350 RLLCLLKNGEILLEY 364


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
 Frame = +1

Query: 7   NGALYWLNVE-EDEEELSLVAFDLAKEEFRIISSPPCFNIDKPDCYQLQVLGGCLSVLHQ 183
           NG L+W++    ++    LV+FDL  E+FR +S P C  +++ + Y L VL GCLS    
Sbjct: 238 NGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCN-YHLVVLRGCLSAAVY 296

Query: 184 RRGEYVDIWSWKKTNNNSSQIEGSWSWSREFRI-----------------VWENKSTEYQ 312
                ++IW  K+ N          SW +E+ I                 +W+N S    
Sbjct: 297 CNYGRLEIWVMKEYNVKE-------SWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRV 349

Query: 313 PFAL--TKRGQVLLWY-NRTISLYD 378
             AL   K G++LL Y NR +  YD
Sbjct: 350 VGALCVLKNGEILLEYKNRVLVSYD 374


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