BLASTX nr result

ID: Papaver22_contig00027754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027754
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...    46   1e-10
ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782...    47   1e-10
gb|ACU17178.1| unknown [Glycine max]                                   47   1e-10
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    49   2e-10
ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|2...    48   1e-09

>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score = 45.8 bits (107), Expect(2) = 1e-10
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = -1

Query: 412 FCEGLSYNTDDQQLKESFNSFGEATDVRVITDRN 311
           F  GLSY  DDQ LK++F S+GE  + RVITDR+
Sbjct: 39  FIGGLSYGVDDQSLKDAFASYGEVVEARVITDRD 72



 Score = 45.1 bits (105), Expect(2) = 1e-10
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
 Frame = -2

Query: 327 LSQTETGRSRGFGYFSYTSEKNAS*GLTSIRSGINASRGEWSWYICSDSISCASDLGGRT 148
           ++  +TGRSRGFG+ ++TS+++A+       S ++A  G+              DL GR 
Sbjct: 68  ITDRDTGRSRGFGFVNFTSDESAT-------SALSAMDGQ--------------DLNGRN 106

Query: 147 -SVSYANERPSRT---GGNFEGSY 88
             VSYAN+RPS     GG + G Y
Sbjct: 107 IRVSYANDRPSAPRGGGGGYGGGY 130


>ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
          Length = 274

 Score = 47.0 bits (110), Expect(2) = 1e-10
 Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -2

Query: 315 ETGRSRGFGYFSYTSEKNAS*GLTSIRSGINASRGEWSWYICSDSISCASDLGGR-TSVS 139
           ETGRSRGFG+ +YTS + AS       S I A  G+              DL GR   V+
Sbjct: 78  ETGRSRGFGFITYTSVEEAS-------SAIQALDGQ--------------DLHGRPIRVN 116

Query: 138 YANERPSRTGGNFEGSY 88
           YANERP   GG   GSY
Sbjct: 117 YANERPRGYGGGGFGSY 133



 Score = 43.5 bits (101), Expect(2) = 1e-10
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -1

Query: 412 FCEGLSYNTDDQQLKESFNSFGEATDVRVITDR 314
           F  G+SY+TD+Q L+E+F+ +GE  D R+I DR
Sbjct: 45  FIGGVSYSTDEQSLREAFSKYGEVVDARIIMDR 77


>gb|ACU17178.1| unknown [Glycine max]
          Length = 196

 Score = 47.0 bits (110), Expect(2) = 1e-10
 Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -2

Query: 315 ETGRSRGFGYFSYTSEKNAS*GLTSIRSGINASRGEWSWYICSDSISCASDLGGR-TSVS 139
           ETGRSRGFG+ +YTS + AS       S I A  G+              DL GR   V+
Sbjct: 78  ETGRSRGFGFITYTSVEEAS-------SAIQALDGQ--------------DLHGRPIRVN 116

Query: 138 YANERPSRTGGNFEGSY 88
           YANERP   GG   GSY
Sbjct: 117 YANERPRGYGGGGFGSY 133



 Score = 43.5 bits (101), Expect(2) = 1e-10
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -1

Query: 412 FCEGLSYNTDDQQLKESFNSFGEATDVRVITDR 314
           F  G+SY+TD+Q L+E+F+ +GE  D R+I DR
Sbjct: 45  FIGGVSYSTDEQSLREAFSKYGEVVDARIIMDR 77


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 48.9 bits (115), Expect(2) = 2e-10
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -1

Query: 412 FCEGLSYNTDDQQLKESFNSFGEATDVRVITDRN 311
           F  GLSY TDDQ LK++F+SFG+  + RVITDR+
Sbjct: 43  FIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRD 76



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
 Frame = -2

Query: 327 LSQTETGRSRGFGYFSYTSEKNAS*GLTSIRSGINASRGEWSWYICSDSISCASDLGGRT 148
           ++  +TGRSRGFG+ ++TS+ +AS       S ++A  G+              +L GR 
Sbjct: 72  ITDRDTGRSRGFGFVNFTSDDSAS-------SALSAMDGQ--------------ELNGRN 110

Query: 147 -SVSYANE-----RPSRTGGNFEGSY 88
             VSYANE     R   +GG F G Y
Sbjct: 111 IRVSYANERTPGPRSGGSGGGFGGGY 136


>ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|222859243|gb|EEE96790.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 48.1 bits (113), Expect(2) = 1e-09
 Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -2

Query: 315 ETGRSRGFGYFSYTSEKNAS*GLTSIRSGINASRGEWSWYICSDSISCASDL-GGRTSVS 139
           ETGRSRGFG+ +YTS + AS       S I A  G+              DL G R  V+
Sbjct: 76  ETGRSRGFGFVTYTSSEEAS-------SAIQALDGQ--------------DLHGRRVRVN 114

Query: 138 YANERPSRTGGNFEGSY 88
           YA ERP RT  N  GSY
Sbjct: 115 YATERPQRTFNNNYGSY 131



 Score = 39.3 bits (90), Expect(2) = 1e-09
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -1

Query: 412 FCEGLSYNTDDQQLKESFNSFGEATDVRVITDR 314
           F  G+S+ TDD  LKE+F+ +G   + R+I DR
Sbjct: 43  FVGGISFQTDDNSLKEAFDKYGNVVEARIIMDR 75


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