BLASTX nr result

ID: Papaver22_contig00027709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027709
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ...   127   7e-28
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   126   2e-27
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   125   4e-27
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   125   4e-27
emb|CAB10381.1| retrotransposon like protein [Arabidopsis thalia...   124   6e-27

>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
           gi|241947225|gb|EES20370.1| hypothetical protein
           SORBIDRAFT_0019s003280 [Sorghum bicolor]
          Length = 761

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/126 (49%), Positives = 83/126 (65%)
 Frame = +2

Query: 2   STGVYAIFLGTSLISWSSKKQPTVSRSTTEAEYKSLYVATAXXXXXXXXXXXXHRSLTLP 181
           ST  YA+FLG+SL+SWSSK+QPTVSRS+ EAEY+++    A            H  ++  
Sbjct: 616 STSGYAVFLGSSLVSWSSKRQPTVSRSSAEAEYRAVANGVAEASWLHQLLQELHHPMSSA 675

Query: 182 ISLYCDNTSSIYLTANPVTHSRTKHIKIHYHAVRELIESGFVQVKHVASEKQLADLFTKG 361
             +YCDN S++YL+ NPV H RTKH++I  H VRE +  G V+V HV +  Q AD+FTKG
Sbjct: 676 CLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRERVAIGVVRVLHVPTTSQFADVFTKG 735

Query: 362 LCALVF 379
           L + VF
Sbjct: 736 LPSSVF 741


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/133 (50%), Positives = 85/133 (63%)
 Frame = +2

Query: 2    STGVYAIFLGTSLISWSSKKQPTVSRSTTEAEYKSLYVATAXXXXXXXXXXXXHRSLTLP 181
            ST  YAIF G +LISWSSKKQ TVSRS+ EAEY+SL VATA            H +L++P
Sbjct: 1208 STTGYAIFFGANLISWSSKKQSTVSRSSAEAEYRSLAVATADIAWIIQLLRDLHVTLSVP 1267

Query: 182  ISLYCDNTSSIYLTANPVTHSRTKHIKIHYHAVRELIESGFVQVKHVASEKQLADLFTKG 361
              + CDN S+I++  NPVT  R+KHI I YH VREL++ G +++  V S  QLAD  TKG
Sbjct: 1268 PKILCDNQSAIFMAVNPVTRPRSKHIAIDYHFVRELVDKGTLKIDFVPSHLQLADSLTKG 1327

Query: 362  LCALVFNLLLQQL 400
            +    F L   +L
Sbjct: 1328 VTKPQFYLFRSKL 1340


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/133 (47%), Positives = 88/133 (66%)
 Frame = +2

Query: 14   YAIFLGTSLISWSSKKQPTVSRSTTEAEYKSLYVATAXXXXXXXXXXXXHRSLTLPISLY 193
            + I+LGTSLI+W SKKQ  VSRS+TE+EY+SL  AT             H ++T P  L+
Sbjct: 1300 FCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLF 1359

Query: 194  CDNTSSIYLTANPVTHSRTKHIKIHYHAVRELIESGFVQVKHVASEKQLADLFTKGLCAL 373
            CDN S+++L  NPV H RTKHI+I  H VR+ I++G ++  HV +  QLAD+ TK L   
Sbjct: 1360 CDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPG 1419

Query: 374  VFNLLLQQLFGST 412
             F+ LL+++FGS+
Sbjct: 1420 PFHSLLKRIFGSS 1432


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/129 (49%), Positives = 84/129 (65%)
 Frame = +2

Query: 14   YAIFLGTSLISWSSKKQPTVSRSTTEAEYKSLYVATAXXXXXXXXXXXXHRSLTLPISLY 193
            Y +FLGTS+ SW SKKQ TV+RS++EAEY++L   T             H SL  PIS+Y
Sbjct: 1550 YCVFLGTSMQSWKSKKQSTVARSSSEAEYRALASLTCELQWLQYLFKDLHISLDQPISVY 1609

Query: 194  CDNTSSIYLTANPVTHSRTKHIKIHYHAVRELIESGFVQVKHVASEKQLADLFTKGLCAL 373
            CDN S+IYL  NP+ H RTKHI+I  H +RE I++G + +  V+S  QLAD+ TK L A 
Sbjct: 1610 CDNKSAIYLAHNPIFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPLPAP 1669

Query: 374  VFNLLLQQL 400
             FN L+ +L
Sbjct: 1670 SFNSLISKL 1678


>emb|CAB10381.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268351|emb|CAB78644.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 326

 Score =  124 bits (312), Expect = 6e-27
 Identities = 71/151 (47%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
 Frame = +2

Query: 2   STGVYAIFLGTSLISWSSKKQPTVSRSTTEAEYKSLYVATAXXXXXXXXXXXXHRSLTLP 181
           STG Y  FLGT+LISWSSKKQPTVSRS+TEAEY+SL                    L + 
Sbjct: 124 STGGYCTFLGTNLISWSSKKQPTVSRSSTEAEYRSLSETAQEMTWICHLLRELGIPLPVT 183

Query: 182 ISLYCDNTSSIYLTANPVTHSRTKHIKIHYHAVRELIESGFVQVKHVASEKQLADLFTKG 361
             LY DN SS+YLTANP  H+R+KH +  YH VRE +  G + VKH+ + +Q+ D+FTK 
Sbjct: 184 PELYGDNLSSVYLTANPAFHARSKHFEFDYHYVRERVALGSLVVKHIPAHQQIVDIFTKS 243

Query: 362 L-----CALVFNLLLQ-----QLFGSTSPII 424
           L     C L F L +      +L GST P++
Sbjct: 244 LPYEAFCNLRFKLGVDLPPTPRLRGSTRPLL 274


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