BLASTX nr result

ID: Papaver22_contig00027627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027627
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614662.1| F-box protein [Medicago truncatula] gi|35551...    58   2e-06
ref|XP_003614687.1| F-box/kelch-repeat protein [Medicago truncat...    56   5e-06
ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncat...    55   9e-06

>ref|XP_003614662.1| F-box protein [Medicago truncatula] gi|355515997|gb|AES97620.1|
           F-box protein [Medicago truncatula]
          Length = 347

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
 Frame = -3

Query: 652 NLVFNDPKFATSHFVQNQNKFSLYFDLYNVCVDNTKKAFYFRVVEEDNIML-DVSC--MT 482
           N + +DPKFA  HF     +FS    ++ +   +  + +  +    D++   DV+C  + 
Sbjct: 74  NSLISDPKFAKKHF-----RFSTTCLIHILTYSSLSQKYTIKSYPLDSLFTKDVACKKIA 128

Query: 481 ALNLPGT--IETVGHCNGLTCIKRVKNRHHKQGALMVINPIRGEQFGLHYATPTGYIYLC 308
              +P    +  VG CNG+ C+      H K    + + P+  +          GYI   
Sbjct: 129 QHEIPSNHAVYIVGSCNGIICVAEY---HIK---FIQLPPLELQL--------NGYILQM 174

Query: 307 SGFGFDPLSQEYKVVVIFTSETKDGFVCMVFTLGSNSWRKITTT 176
            GFG DP+S  YKVVV+F    +   V +V  +G+N W+ I  T
Sbjct: 175 HGFGHDPISDNYKVVVVFLDNNRTD-VKVVHNVGTNFWKDIIET 217


>ref|XP_003614687.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516022|gb|AES97645.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 386

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
 Frame = -3

Query: 652 NLVFNDPKFATSHFVQNQNKFSLYFDLYNVCVDNTKKAFYFRVVEEDNIML-DVSC--MT 482
           N + +DPKFA  HF     +FS    ++ +   +  + +  +    D++   DV+C  + 
Sbjct: 74  NSLISDPKFAKKHF-----RFSTTCLIHILTYSSLSQKYTIKSYPLDSLFTKDVACKKIA 128

Query: 481 ALNLPGT--IETVGHCNGLTCIKRVKNRHHKQGALMVINPIRGEQFGLHYATPTGYIYLC 308
              +P    +  VG CNG+ C+      H K    + + P+  +          GYI   
Sbjct: 129 QHEIPSNHAVYIVGSCNGIICVAEY---HIK---FIQLPPLELQL--------NGYILQM 174

Query: 307 SGFGFDPLSQEYKVVVIF----TSETKDGFVCMVFTLGSNSWRKITTT 176
            GFG DP+S  YKVVV+F    +++     V +V  +G+N W+ I  T
Sbjct: 175 HGFGHDPISDNYKVVVVFLDYDSTDNNKTDVKVVHNVGTNIWKDIKET 222


>ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516029|gb|AES97652.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 396

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
 Frame = -3

Query: 652 NLVFNDPKFATSHFVQNQNKFSLYFDLYNVCVDNTKKAFYFRVVEEDNIML-DVSC---- 488
           N + +DPKFA  HF+     FS    ++ +   +    +  +    D++   DV+C    
Sbjct: 74  NSLISDPKFAKKHFL-----FSTTCLIHILAYSSLSHKYIIKSYPLDSLFTKDVACNKIA 128

Query: 487 MTALNLPGTIETVGHCNGLTCIKRVKNRHHKQGALMVINPI--RGEQFGLHYATPTGYIY 314
              +    +I  VG CNG+ C+    + + +     + NP   + ++        TGY  
Sbjct: 129 QHEIASNHSIYNVGSCNGIICVAEY-HIYERFVIYRLWNPSIRKFKELPPLELQHTGYNL 187

Query: 313 LCSGFGFDPLSQEYKVVVIFTSETKDGFVCMVFTLGSNSWRKITTT 176
              GFG DP+S  YKVVV+F    K   V ++  +G+N W+ I  T
Sbjct: 188 QMHGFGHDPISDNYKVVVVFRDHNKTD-VKVLHNVGTNIWKDIKET 232


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