BLASTX nr result

ID: Papaver22_contig00027557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027557
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    68   8e-10
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    65   6e-09
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    57   2e-06
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...    57   2e-06
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               55   5e-06

>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
 Frame = -2

Query: 503 KSFAGICIRYLESL----QLIVCGAEGEVLFQKSFTGIQALNAVFSTMTPSEKQDNTLVL 336
           KSF+ +C +   SL    +L +   + ++L Q   T ++ +N+VF +M   +KQ NT +L
Sbjct: 168 KSFSMVCSKLQTSLLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDIL 227

Query: 335 KRLLTYVKTQGSRLLAAECMKEIDVMLHSLDAPFDVSSGKAYPIER--EVLMKREAKELV 162
            RLL   KTQ   LL++E +KE+D ++ S++     S+ +         V+   + K+  
Sbjct: 228 SRLLFNAKTQLPALLSSEQLKELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSH 287

Query: 161 PSVENPPLQGLSSLKKLDLQAMSVKPRVCIDRNLGPEALRTGLTSCK 21
            S EN   Q  +S+ K DL  +S+K     ++++  E+++ GL + K
Sbjct: 288 KSSENAN-QDFTSVNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSK 333


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
 Frame = -2

Query: 506 QKSFAGICIRY---LESLQLI----VCGAEG----EVLFQKSFTGIQALNAVFSTMTPSE 360
           +KSF+G+C R    L SLQ +    V G       + L Q+    I+ALN VF +M  ++
Sbjct: 202 EKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQ 261

Query: 359 KQDNTLVLKRLLTYVKTQGSRLLAAECMKEIDVMLHSLDAPFDVSSGKAYPIEREV-LMK 183
           K+ N  V  RLL+ V+   S + + + +KE++VM+  LD P   SS +A     +V +  
Sbjct: 262 KELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTD 321

Query: 182 REAKELVPSVENPPLQGLSSLKKLDLQAMSVKPRVCIDRNLGPEALRTGLTSCK 21
              + ++ S      +  +S KKL L ++SV+     ++N  P+AL+ GL+S +
Sbjct: 322 GMNRNILDSSVESSGRAFASAKKLSLDSISVE---SYNQN-NPDALKPGLSSSR 371


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
 Frame = -2

Query: 506 QKSFAGICIRYLESLQLIVCGAEGEV------LFQKSFTGIQALNAVFSTMTPSEKQDNT 345
           QKSF  +C +   S++  V   +G+V      L Q+ +  ++ +N+VF +M  SEK+++ 
Sbjct: 214 QKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHK 273

Query: 344 LVLKRLLTYVKTQGSRLLAAECMKEIDVMLHSLDAPFDVSSGKAYPIEREVLMKREAKEL 165
             L RLL+YVK     L + E +K ++V + S D+   + S +    E E+ +    K++
Sbjct: 274 EHLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDM 333

Query: 164 -VPSVENPPLQGLSSLKKLDLQAMSVKPRVCIDRNLGPEALRTGLTSCK 21
              S        L+   KL   ++    +   + N+  E L++G++S K
Sbjct: 334 DFYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIK 382


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Cucumis sativus]
          Length = 1249

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
 Frame = -2

Query: 506 QKSFAGICIRYLESLQLIVCGAEGEV------LFQKSFTGIQALNAVFSTMTPSEKQDNT 345
           QKSF  +C +   S++  V   +G+V      L Q+ +  ++ +N+VF +M  SEK+++ 
Sbjct: 214 QKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHK 273

Query: 344 LVLKRLLTYVKTQGSRLLAAECMKEIDVMLHSLDAPFDVSSGKAYPIEREVLMKREAKEL 165
             L RLL+YVK     L + E +K ++V + S D+   + S +    E E+ +    K++
Sbjct: 274 EHLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDM 333

Query: 164 -VPSVENPPLQGLSSLKKLDLQAMSVKPRVCIDRNLGPEALRTGLTSCK 21
              S        L+   KL   ++    +   + N+  E L++G++S K
Sbjct: 334 DFYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIK 382


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
 Frame = -2

Query: 506 QKSFAGICIRY---LESLQLI----VCGAEG----EVLFQKSFTGIQALNAVFSTMTPSE 360
           +KSF+G+C R    L SLQ +    V G       + L Q+    I+ALN VF +M  ++
Sbjct: 213 EKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQ 272

Query: 359 KQDNTLVLKRLLTYVKTQGSRLLAAECMKEIDVMLHSLDAPFDVSSGKA 213
           K+ N  V  RLL+ V+   S + + + +KE++VM+  LD P   SS +A
Sbjct: 273 KELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEA 321


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