BLASTX nr result

ID: Papaver22_contig00027374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027374
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   126   2e-26
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...   120   1e-24
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   2e-22
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   4e-21
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...   108   5e-21

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  126 bits (316), Expect = 2e-26
 Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
 Frame = -3

Query: 872 MKFFSWNCQGFNDPHTRDYFRFFLTQYDPDIFFLSDTKSQTNKMRFYLTHTHYPNYWFAP 693
           M+  SWNCQG  +  T  + R     Y P++ FL +TK + N +   + H  + +     
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 692 SLGLSDGIAIAWKNCVDMELMHTSSDTIHAIIHTHDNHPDILLTCMYGAHNVAENNFQW* 513
            +G S G+A+ WK+ V ++++ +    I A++   D   +  LTC+YG    AE    W 
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDK--EFYLTCIYGEPVQAERGELWE 118

Query: 512 YLMEMHNEVDLPWVILGDLNFTIHDSETXXXXXXXXXXXXHVRYFVHQMGLFDLGYTGSD 333
            L  +      PW++ GD N  +  SE               R  ++  GL+++ ++G  
Sbjct: 119 RLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQ 178

Query: 332 TTWYNHRFSDDYVSVRLGRALVNNLWVTQYTQDHLEHLVPVASDHSPILLHTL-PYQRKH 156
            +WY +R +D+ V  RL R + N  W+  + Q    +L  + SDHSP++ + +    RK 
Sbjct: 179 FSWYGNR-NDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKW 237

Query: 155 SPFKLYRYWFRLGSCNDTITQSW*HQFLGSPSY*FSCKLKYTRTQLRLWKK 3
           + FK  + W +     D +   W  Q   + +     K+   R ++  WK+
Sbjct: 238 AGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMME-KIASCRREISKWKR 287


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score =  120 bits (300), Expect = 1e-24
 Identities = 80/271 (29%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
 Frame = -3

Query: 872 MKFFSWNCQGFNDPHTRDYFRFFLTQYDPDIFFLSDT---KSQTNKMRFYLTHTHYPNYW 702
           MK   WNC+G  +P T    R     Y P + F+ +T   K +   +R+ L+   + N +
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLS---FDNSF 57

Query: 701 FAPSLGLSDGIAIAWKNCVDMELMHTSSDTIHAIIHTHDNHPDILLTCMYGAHNVAENNF 522
              S G S G+ + W N V + +   S+  I  II  H   P   ++ +YG  N +    
Sbjct: 58  AVNSSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPR-RMSFIYGEPNRSFRYR 116

Query: 521 QW*YLMEMHNEVDLPWVILGDLNFTIHDSETXXXXXXXXXXXXHVRYFVHQMGLFDLGYT 342
            W  + +M ++ DLPWV +GD N  +   E              VR  V    L D+GY 
Sbjct: 117 TWDIMKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRDIGYI 176

Query: 341 GSDTTWYNHRFSDDYVSVRLGRALVNNLWVTQYTQDHLEHLVPVASDHSPILLHTLPYQR 162
           G D T+        +V VRL RAL +  W  ++    ++HL  V SDH PILL  +P +R
Sbjct: 177 GLDWTFEKKVAGGHFVRVRLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLSHVPDER 236

Query: 161 KH------SPFKLYRYWFRLGSCNDTITQSW 87
                    PF+    W      +  I Q W
Sbjct: 237 NEGGGCQGKPFRYELMWETNERLSSLIEQIW 267


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  112 bits (281), Expect = 2e-22
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 4/266 (1%)
 Frame = -3

Query: 872 MKFFSWNCQGFNDPHTRDYFRFFLTQYDPDIFFLSDTKSQTNKMRFYLTHTHYPNYWFAP 693
           MK   WN +G N      +    +  + PD+  L +TK  + +         Y N+   P
Sbjct: 1   MKAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIP 60

Query: 692 SLGLSDGIAIAWKNCVDMELMHTSS---DTIHAIIHTHDNHPDILLTCMYGAHNVAENNF 522
           + G   GI + WK   D+ L+H +    +  HA+     + P++LLT M+    V+E N 
Sbjct: 61  AFGKRGGIWLMWK--ADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNK 118

Query: 521 QW*YLMEMHNEVDLPWVILGDLNFTIHDSETXXXXXXXXXXXXHVRYFVHQMGLFDLGYT 342
            W  L E       PW++ GD+N  +H +E               + ++    L DLG+ 
Sbjct: 119 YWVDLTEDSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQ 178

Query: 341 GSDTTWYNHRFSDDYVSVRLGRALVNNLWVTQYTQDHLEHLVPVASDHSPILLHTLPYQR 162
           G   TW N R     +  RL RALVN+ W+  +    + HL    SDH P+L+      R
Sbjct: 179 GPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLILFNENPR 238

Query: 161 KHS-PFKLYRYWFRLGSCNDTITQSW 87
             S PF+    W       + I ++W
Sbjct: 239 SESFPFRCKEVWAYHPDFTNVIEETW 264


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  108 bits (270), Expect = 4e-21
 Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 5/295 (1%)
 Frame = -3

Query: 872 MKFFSWNCQGFN--DPHTRDYFRFFLTQYDPDIFFLSDTKSQTNKMRFYLTHTHYPNYWF 699
           MK  +WNC+G    D  T  +  + + Q  P I FLS+TKS ++ +     +  +PN   
Sbjct: 1   MKVLAWNCRGLRSADSPTIPFLGWLVRQCLPQILFLSETKSDSSLISKLAMYLGFPNVAT 60

Query: 698 APSLGLSDGIAIAWKNCVDMELMHTSSDTIHAIIHTHDNHPDIL--LTCMYGAHNVAENN 525
             S+  + G+A+ W N V+++L  +S++     I+   +    +  L  +YG+  +    
Sbjct: 61  VDSINNAGGLALFWSNDVNLDLKVSSTNYFACNINDLVDEDVYIWNLILLYGSPYLDNRG 120

Query: 524 FQW*YLMEMHNEVDLPWVILGDLNFTIHDSETXXXXXXXXXXXXHVRYFVHQMGLFDLGY 345
             W  + +  +   L  VI+GD N  I                     +  Q+GL ++ +
Sbjct: 121 EVWERIADYISRNPLDSVIMGDFN-QIEFLNQKMGGSTYIPGKETFSQWRDQLGLSEINF 179

Query: 344 TGSDTTWYNHRFSDDYVSVRLGRALVNNLWVTQYTQDHLEHLVPVASDHSPILLHTLP-Y 168
            G + TW N+R   + V  RL RA     W+ +Y++  + ++  + SDHSPILL + P Y
Sbjct: 180 QGQNFTWCNNRSEPERVYERLDRAYATEDWLHRYSEARILNMPILISDHSPILLISSPIY 239

Query: 167 QRKHSPFKLYRYWFRLGSCNDTITQSW*HQFLGSPSY*FSCKLKYTRTQLRLWKK 3
            +K S  K+  +          I++ W   + GSP Y  + K K  R +L  W K
Sbjct: 240 PKKKSTIKMESWCLDFKEVEILISKHWKVSYSGSPMYEVAQKCKSVRYKLFQWCK 294


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score =  108 bits (269), Expect = 5e-21
 Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 9/297 (3%)
 Frame = -3

Query: 872 MKFFSWNCQGFNDP---HTRDYFRFFLTQYDPDIFFLSDTKSQTNKMRFYLTHTHYPNYW 702
           M   SWNC+G          ++    LT     + F+S+T++ T      +   +  + +
Sbjct: 1   MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAF 60

Query: 701 FAPSLGLSDGIAIAWKNCVDMELMHTSSDTIHAIIHTHDNHPDILLTCMYGAHNVAENNF 522
             P+ G S G+ + WK    + ++  S + I A+ + + ++    L C+YG  +      
Sbjct: 61  IIPAQGQSGGLWLIWKQDFSLTIVDQSPNYIFALCNNNLDNRQFGLICLYGDPHHHNTTS 120

Query: 521 QW*YLMEMHNEV----DLPWVILGDLNFTIHDSETXXXXXXXXXXXXHVRYFVHQMGLFD 354
            W   M++H+ V    ++P   +GDLN  +H  E                  V + G  D
Sbjct: 121 IW---MQVHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFID 177

Query: 353 LGYTGSDTTWYNHRFSDDYVSVRLGRALVNNLWVTQYTQDHLEHLVPVASDHSPI--LLH 180
           LGY+G   TW N RFS      RL R L N  W   Y +  + HL  + SDH+PI  LL 
Sbjct: 178 LGYSGPAYTWTNKRFSTTPTFERLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLD 237

Query: 179 TLPYQRKHSPFKLYRYWFRLGSCNDTITQSW*HQFLGSPSY*FSCKLKYTRTQLRLW 9
           +  Y     PF+   +W       +T  +SW      S +  F  K KY    L+ W
Sbjct: 238 SNTYNNT-KPFRFENWWLMEQDYEETAKKSW----QRSTNRLFHQKTKYLAVDLKKW 289


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