BLASTX nr result

ID: Papaver22_contig00027272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027272
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra...   224   2e-56
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   224   2e-56
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              222   6e-56
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   222   6e-56
ref|NP_173925.3| phytochrome and flowering time regulatory prote...   204   1e-50

>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like, partial [Cucumis sativus]
          Length = 595

 Score =  224 bits (570), Expect = 2e-56
 Identities = 99/149 (66%), Positives = 124/149 (83%), Gaps = 3/149 (2%)
 Frame = +1

Query: 232 MAEKQLIIAIEGTAAMGPYWNSIVTEYLEKIIRCFCGNDMSGQKLSSASTELSLVVFTVH 411
           MA+KQLI+ +EGTAAMGP+W ++V++Y+EKI+R FCGN+++GQK  +++ E SLV F  H
Sbjct: 1   MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 412 GSYCGCLVQRSGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMMFALPPN---SS 582
           GSYCGCLVQR+GWTRD D+F+ WLSA+PFSGGGF DAA+ EGLAEALMMF   PN   + 
Sbjct: 61  GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120

Query: 583 QSAEMNKHCILVAASNPYSLPTPVYRPRI 669
           Q+ +M KHCILVAASNPY LPTPVYRP +
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAV 149


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Cucumis sativus]
          Length = 858

 Score =  224 bits (570), Expect = 2e-56
 Identities = 99/149 (66%), Positives = 124/149 (83%), Gaps = 3/149 (2%)
 Frame = +1

Query: 232 MAEKQLIIAIEGTAAMGPYWNSIVTEYLEKIIRCFCGNDMSGQKLSSASTELSLVVFTVH 411
           MA+KQLI+ +EGTAAMGP+W ++V++Y+EKI+R FCGN+++GQK  +++ E SLV F  H
Sbjct: 1   MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 412 GSYCGCLVQRSGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMMFALPPN---SS 582
           GSYCGCLVQR+GWTRD D+F+ WLSA+PFSGGGF DAA+ EGLAEALMMF   PN   + 
Sbjct: 61  GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120

Query: 583 QSAEMNKHCILVAASNPYSLPTPVYRPRI 669
           Q+ +M KHCILVAASNPY LPTPVYRP +
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAV 149


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  222 bits (565), Expect = 6e-56
 Identities = 101/149 (67%), Positives = 128/149 (85%), Gaps = 3/149 (2%)
 Frame = +1

Query: 232 MAEKQLIIAIEGTAAMGPYWNSIVTEYLEKIIRCFCGNDMSGQKLSSASTELSLVVFTVH 411
           MAEKQL++A+EGTAAMGPYW ++V++YL+KIIR FCGN+++GQK SS++ ELSLV+F  H
Sbjct: 1   MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 412 GSYCGCLVQRSGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMMFALPPNSS--- 582
           GSYC CLVQRSGWTRD D+FL WLSA+PF+GGGF DAA+ EGLAEALMMF++  N S   
Sbjct: 61  GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 583 QSAEMNKHCILVAASNPYSLPTPVYRPRI 669
           Q+ +  +HCILVAA+NPY LPTPVY+P++
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQM 149


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  222 bits (565), Expect = 6e-56
 Identities = 101/149 (67%), Positives = 128/149 (85%), Gaps = 3/149 (2%)
 Frame = +1

Query: 232 MAEKQLIIAIEGTAAMGPYWNSIVTEYLEKIIRCFCGNDMSGQKLSSASTELSLVVFTVH 411
           MAEKQL++A+EGTAAMGPYW ++V++YL+KIIR FCGN+++GQK SS++ ELSLV+F  H
Sbjct: 1   MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 412 GSYCGCLVQRSGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMMFALPPNSS--- 582
           GSYC CLVQRSGWTRD D+FL WLSA+PF+GGGF DAA+ EGLAEALMMF++  N S   
Sbjct: 61  GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 583 QSAEMNKHCILVAASNPYSLPTPVYRPRI 669
           Q+ +  +HCILVAA+NPY LPTPVY+P++
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQM 149


>ref|NP_173925.3| phytochrome and flowering time regulatory protein 1 [Arabidopsis
           thaliana] gi|75145501|sp|Q7XYY2.1|MED25_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           25; Short=AtMED25; AltName: Full=Phytochrome and
           flowering time 1 protein; AltName: Full=Phytochrome and
           flowering time regulatory protein 1
           gi|32478899|gb|AAO39425.1| phytochrome and flowering
           time 1 protein [Arabidopsis thaliana]
           gi|332192518|gb|AEE30639.1| phytochrome and flowering
           time regulatory protein 1 [Arabidopsis thaliana]
          Length = 836

 Score =  204 bits (519), Expect = 1e-50
 Identities = 91/144 (63%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
 Frame = +1

Query: 241 KQLIIAIEGTAAMGPYWNSIVTEYLEKIIRCFCGNDMSGQKLSSASTELSLVVFTVHGSY 420
           KQLI+  EGTAA+GPYW +IV++YLEKIIR FCG++++G++   ++ ELSLV+F  HGSY
Sbjct: 6   KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65

Query: 421 CGCLVQRSGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMMFALPPNSSQ-SAEM 597
           C CLVQRSGWTRD D+FLHWLS++ F GGGF + A  EGLAEALMMF+ P   +Q S ++
Sbjct: 66  CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQPSNDL 125

Query: 598 NKHCILVAASNPYSLPTPVYRPRI 669
            +HCIL+ ASNP+ LPTPVYRPR+
Sbjct: 126 KRHCILITASNPHILPTPVYRPRL 149


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