BLASTX nr result

ID: Papaver22_contig00027042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027042
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    61   2e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    60   3e-07
ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242...    57   4e-06
ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210...    56   6e-06
ref|XP_002314727.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06

>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -3

Query: 635 GNPGAAGIGFVSRNQEGAFLFAEVRGLGIATSFIAELMAVIYAAEWDVKKGFQNLIVRSG 456
           G P     G V RN +   L    + +G AT F AEL A I+A E  ++   +++ + + 
Sbjct: 21  GAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETD 80

Query: 455 SKAAVATFLNG-NIPWFLKSRWSSILATSLQLSIL--HSYKEINTTANALAIRGAGMNKG 285
           SK  V  F +  ++PW L++RW++ LA + ++  +  H ++E N  A++LA  G  +   
Sbjct: 81  SKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGNAGADSLAKNGKSLALL 140

Query: 284 ENQEFLKKPKF 252
            +Q +   P F
Sbjct: 141 TSQWWSSSPLF 151


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = -3

Query: 626  GAAGIGFVSRNQEGAFLFAEVRGLGIATSFIAELMAVIYAAEWDVKKGFQNLIVRSGSKA 447
            G A  G + R+  G+FL A    +G+A+ F AE +A I A E     G++NL + S S +
Sbjct: 1034 GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTS 1093

Query: 446  AVATFLNGN-IPWFLKSRWSSILATSLQLSILHSYKEINTTANALAIRGAGM 294
            A+  F N + + W L++RW +     +Q+   H   E N  A+ LA  G G+
Sbjct: 1094 ALMIFSNSSLVQWLLRNRWHNAQRLGIQVISSHILHEGNRCADNLANMGHGI 1145


>ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242330 [Vitis vinifera]
           gi|296087711|emb|CBI34967.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
 Frame = -3

Query: 635 GNPGAAGIGFVSRNQEGAFLFAEVRGLGIATSFIAELMAVIYAAEWDVKKGFQNLIVRSG 456
           GNPG AG G V R  +G+ +     G+GIAT+ +AE  A+I   ++ +KKG + +  R  
Sbjct: 158 GNPGQAGAGAVLRADDGSAVIHLREGVGIATNNVAEYRALILGMKYALKKGIKRIRARGD 217

Query: 455 SKAAVATFLNGNIPWFLKSRWSSILATS--------LQLSILHSYKEINTTANALAIRGA 300
           S+     F      W  K++  + L           L   I H  +E N+ A+A A    
Sbjct: 218 SQLVCMQFQG---LWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFNSEADAQANLAV 274

Query: 299 GMNKGENQEFLKK 261
            +  G+ QE  KK
Sbjct: 275 NLTNGQVQEEYKK 287


>ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210930 [Cucumis sativus]
          Length = 373

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
 Frame = -3

Query: 635 GNPGAAGIGFVSRNQEGAFLFAEVRGLGIATSFIAELMAVIYAAEWDVKKGFQNLIVRSG 456
           GNPG AG G V R  +G+ +     GLGIAT+ +AE  A++   +  +KKGF  + V+  
Sbjct: 245 GNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRIHVQGD 304

Query: 455 SKAAVATFLNGNIPWFLKSRWSSILATS--------LQLSILHSYKEINTTANALAIRGA 300
           SK  V   + G   W  K    S L           L   + H  + +N+ A+A A    
Sbjct: 305 SK-LVCMQVQG--LWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANLAL 361

Query: 299 GMNKGENQEF 270
            + +GE QEF
Sbjct: 362 TLAEGEVQEF 371


>ref|XP_002314727.1| predicted protein [Populus trichocarpa] gi|222863767|gb|EEF00898.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
 Frame = -3

Query: 635 GNPGAAGIGFVSRNQEGAFLFAEVRGLGIATSFIAELMAVIYAAEWDVKKGFQNLIVRSG 456
           GNPG AG G V R  +G+ +     GLGIAT+ +AE  A++   ++ ++KG+  + V+  
Sbjct: 154 GNPGQAGAGAVLRTDDGSLICRLREGLGIATNNMAEYRAILLGMKYALQKGYTKIQVKGD 213

Query: 455 SKAAVATFLNGNIPWFLKSRWSSILATS--------LQLSILHSYKEINTTANALAIRGA 300
           SK  V   + G+  W  K    + L T         L   I H  +E N+ A+A A    
Sbjct: 214 SK-LVCMQIQGS--WKAKHVNITNLCTEAKKLKNSFLSFHISHVLREFNSEADAQANLAV 270

Query: 299 GMNKGENQE 273
            +  GE QE
Sbjct: 271 HLADGEVQE 279


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