BLASTX nr result

ID: Papaver22_contig00026418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026418
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]      59   7e-07
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      58   1e-06
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    58   1e-06
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    57   2e-06

>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
           gi|223549726|gb|EEF51214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 22/56 (39%), Positives = 39/56 (69%)
 Frame = +2

Query: 431 RHPKVDFPYFDGTNPRGWFLKCERYFFLHQLPDSERVDMAAIHFTSKFDPWFLDYQ 598
           R PKV+  +F+G NPR W  KCE+YF L+ +P+ +++D+A+++   + D W+  +Q
Sbjct: 107 RIPKVELSHFEGNNPRLWIKKCEKYFQLYSIPNEQKIDIASLYLGDRADIWYQGWQ 162


>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1263

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = +2

Query: 329 PSPESGYYTESGHFS--HGIK---DLIKGNPDR--EHGKFSRHPKVDFPYFDGTNPRGWF 487
           P P  G Y     FS  HGI+   +  +GN D   E G   R PK+DFP FDG++P+GW 
Sbjct: 139 PPPVKGTYQIPTEFSVPHGIEFGANSSRGNRDLHGEQGFNHRLPKLDFPQFDGSDPQGWR 198

Query: 488 LKCERYFFLHQLPDSERVDMAAIHFTSKFDPW 583
           L+CE YF ++    +  V +A I+F  +   W
Sbjct: 199 LRCEHYFGVYGTHPNLWVWVATIYFMGRAASW 230


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +2

Query: 326 PPSPESGYYTESGHFSHGIKDLIKGNPD-REHGKFSRHPKVDFPYFDGTNPRGWFLKCER 502
           P  P+    ++SG FS G + L +       +G  +R  KV FP FDG   RGW  +CE+
Sbjct: 137 PKPPDPPDLSKSGQFSVGKRPLEEDRATVHPNGLITRLSKVGFPSFDGNGLRGWLYRCEQ 196

Query: 503 YFFLHQLPDSERVDMAAIHFTSKFDPWFLDYQQ 601
           +F L   P   RV  A++H   K   W  +Y +
Sbjct: 197 FFSLDGTPPEMRVRYASMHMEGKALEWHHNYMR 229


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 2202

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
 Frame = +2

Query: 326 PPSPESGYYTESGHFSHGI------KDLIKGNPDREHGKFSRHPKVDFPYFDGTNPRGWF 487
           PP P     T +  FSH        +D + G+ DR  G   R PK+DFP FDG +P+ W 
Sbjct: 417 PPVPPQVTGTTNSPFSHRFACDSLHRDEVGGSEDR--GYNHRVPKLDFPQFDGVDPQNWR 474

Query: 488 LKCERYFFLHQLPDSERVDMAAIHFTSKFDPW 583
           ++CE YF ++       V +A I+FT +   W
Sbjct: 475 MRCEHYFGVYGTHPILWVRVATIYFTGRAASW 506


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
 Frame = +2

Query: 191 ETLEELKKNFQDLESRLTQAETDRTLATSRIDSNFSCLFKFLGVEPPSPESGYYTESGH- 367
           E  +E+ K F DL + L+     R+ A   +D   +     L    P         SG+ 
Sbjct: 35  EQHKEMMKQFADLYAVLS-----RSTAGKMVDEQST-----LDRSAPRSSQSMENRSGYP 84

Query: 368 --FSHGIKDLIKGNPDREHGKFSRHPKVDFPYFDGTNPRGWFLKCERYFFLHQLPDSERV 541
             +       ++ +    +   +R  K+DFP FDGT  + W  K E +F +   P+  +V
Sbjct: 85  DPYRDARHQQVRSDHFNAYNNLTRLGKIDFPRFDGTRLKEWLFKVEEFFGVDSTPEDMKV 144

Query: 542 DMAAIHFTSKFDPW---FLDYQQGNGELHERNGTIKI 643
            MAAIHF S    W   F+    G   L++  G +K+
Sbjct: 145 KMAAIHFDSHASTWHQSFIQSGVGLEVLYDWKGYVKL 181


Top