BLASTX nr result

ID: Papaver22_contig00026352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026352
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor...    91   1e-16
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor...    91   1e-16
ref|NP_850310.1| RING/U-box domain-containing protein [Arabidops...    91   1e-16
gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis th...    91   1e-16

>ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|222871537|gb|EEF08668.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/100 (44%), Positives = 61/100 (61%)
 Frame = -2

Query: 443 SMGRRNLSSTSKVSSITKRIFNAIRDKSCPICLQNFDNLHHHYHYQQVAVLTFCMHAYCI 264
           S+  R     S+   ++K I  AIR +SCP+CL++F        Y++VAV+  C+HAYC+
Sbjct: 6   SIASRRSKRQSQEKFLSKVILPAIRGQSCPVCLKDFGG---EEDYRRVAVIRVCLHAYCL 62

Query: 263 RCIHKWSHLKRNCPLCNAEFDSWFSNFRAFTGKFENFRLP 144
            CI KWS +KR CPLCN+EF+SWF      T  F   +LP
Sbjct: 63  DCIRKWSDIKRKCPLCNSEFNSWFCRIILSTRNFSTEKLP 102


>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
           sativus]
          Length = 288

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/84 (51%), Positives = 54/84 (64%)
 Frame = -2

Query: 398 ITKRIFNAIRDKSCPICLQNFDNLHHHYHYQQVAVLTFCMHAYCIRCIHKWSHLKRNCPL 219
           ITK I  AI  ++CPICL+  ++       +  AVLT C+HAYCI CI KWS+LKR CPL
Sbjct: 20  ITKVISPAICGETCPICLRELED-------RTAAVLTTCIHAYCISCIRKWSNLKRTCPL 72

Query: 218 CNAEFDSWFSNFRAFTGKFENFRL 147
           CNA+FDSWF+     +  F   RL
Sbjct: 73  CNAQFDSWFTKINLSSQSFRKERL 96


>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
           sativus]
          Length = 288

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/84 (51%), Positives = 54/84 (64%)
 Frame = -2

Query: 398 ITKRIFNAIRDKSCPICLQNFDNLHHHYHYQQVAVLTFCMHAYCIRCIHKWSHLKRNCPL 219
           ITK I  AI  ++CPICL+  ++       +  AVLT C+HAYCI CI KWS+LKR CPL
Sbjct: 20  ITKVISPAICGETCPICLRELED-------RTAAVLTTCIHAYCISCIRKWSNLKRTCPL 72

Query: 218 CNAEFDSWFSNFRAFTGKFENFRL 147
           CNA+FDSWF+     +  F   RL
Sbjct: 73  CNAQFDSWFTKINLSSQSFRKERL 96


>ref|NP_850310.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|17473924|gb|AAL38373.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|20148385|gb|AAM10083.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|330254541|gb|AEC09635.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 296

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/107 (42%), Positives = 58/107 (54%)
 Frame = -2

Query: 446 PSMGRRNLSSTSKVSSITKRIFNAIRDKSCPICLQNFDNLHHHYHYQQVAVLTFCMHAYC 267
           PS  R   S  S      + IF A++ KSCPICL+N          +  AV+T C H YC
Sbjct: 10  PSSSRHLRSPESIAKFAGRAIFPALQGKSCPICLENLTER------RSAAVITVCKHGYC 63

Query: 266 IRCIHKWSHLKRNCPLCNAEFDSWFSNFRAFTGKFENFRLPDLDNKK 126
           + CI KWS  KRNCPLCN  FDSWF      + K+   +LP L +++
Sbjct: 64  LACIRKWSSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQLPILRDRE 110


>gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 270

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/107 (42%), Positives = 58/107 (54%)
 Frame = -2

Query: 446 PSMGRRNLSSTSKVSSITKRIFNAIRDKSCPICLQNFDNLHHHYHYQQVAVLTFCMHAYC 267
           PS  R   S  S      + IF A++ KSCPICL+N          +  AV+T C H YC
Sbjct: 10  PSSSRHLRSPESIAKFAGRAIFPALQGKSCPICLENLTER------RSAAVITVCKHGYC 63

Query: 266 IRCIHKWSHLKRNCPLCNAEFDSWFSNFRAFTGKFENFRLPDLDNKK 126
           + CI KWS  KRNCPLCN  FDSWF      + K+   +LP L +++
Sbjct: 64  LACIRKWSSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQLPILRDRE 110


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