BLASTX nr result

ID: Papaver22_contig00026236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026236
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici...   120   4e-25
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2...   120   4e-25
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   117   3e-24
gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sa...   117   3e-24

>ref|XP_002316998.1| predicted protein [Populus trichocarpa] gi|222860063|gb|EEE97610.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  121 bits (303), Expect = 2e-25
 Identities = 63/121 (52%), Positives = 81/121 (66%)
 Frame = +1

Query: 514 VGNSQIGKDDSHGFKVYVGDLAPDVTDNLLIQTFNRRYVSVTNAHVVTDKATGCSKGYGF 693
           +G  +  +DD   F V+VGDLA DV D LL +TF   Y SV  A VVTD+ TG SKGYGF
Sbjct: 149 LGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGF 208

Query: 694 LSFADECEQKRAIAEMDGQYCSTKRMRVKPPHDKRTVAVRQPQHPQATYQSTPGAQNESD 873
           + FADE EQ+RA+ EM+GQYCST+ MR+ P   K+ +     Q+ +ATYQ+  G Q E+D
Sbjct: 209 IRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLT---QQYQKATYQNPQGNQGEND 265

Query: 874 P 876
           P
Sbjct: 266 P 266


>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223537765|gb|EEF39383.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 404

 Score =  120 bits (301), Expect = 4e-25
 Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
 Frame = +1

Query: 445 QLQQSYASGSSQPQRADEGR----TLRVGNSQIGKDDSHGFKVYVGDLAPDVTDNLLIQT 612
           ++ Q+Y +G+  P      R    TL  G  +  +DD   + V+VGDLAPDV D +L +T
Sbjct: 122 RILQTY-NGTQMPNTEQNFRLNWATLAAGERR--QDDGPDYTVFVGDLAPDVNDFILQET 178

Query: 613 FNRRYVSVTNAHVVTDKATGCSKGYGFLSFADECEQKRAIAEMDGQYCSTKRMRVKPPHD 792
           F   Y SV  A VVTD+ TG +KGYGF+ F DE EQ+RA+ EM+GQYCST+ MR+ P   
Sbjct: 179 FRTVYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAAT 238

Query: 793 KRTVAVRQPQHPQATYQSTPGAQNESDP 876
           K+       Q+ +A YQST G Q E+DP
Sbjct: 239 KKPAV---QQYQKAPYQSTQGTQGENDP 263


>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  120 bits (301), Expect = 4e-25
 Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
 Frame = +1

Query: 409 PPSQGITPYMQHQLQQSYASGSSQPQRADEGRTLRVGNSQIG-----KDDSHGFKVYVGD 573
           P   G   ++ H   +      +     +  +T R+  + +G     +DD   + V++GD
Sbjct: 107 PEGYGFIEFVSHAAAERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGD 166

Query: 574 LAPDVTDNLLIQTFNRRYVSVTNAHVVTDKATGCSKGYGFLSFADECEQKRAIAEMDGQY 753
           LA DV D LL +TF   Y SV  A VVTD+ TG SKGYGF+ FADE EQ RA+ EM+GQY
Sbjct: 167 LAADVNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQY 226

Query: 754 CSTKRMRVKPPHDKRTVAVRQPQHPQATYQSTPGAQNESDP 876
           CST+ MR+ P   K+ +     Q+ +A YQS  G Q ESDP
Sbjct: 227 CSTRPMRIGPAATKKPLT---QQYQKAAYQSPQGNQGESDP 264


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  117 bits (293), Expect = 3e-24
 Identities = 63/141 (44%), Positives = 88/141 (62%)
 Frame = +1

Query: 454 QSYASGSSQPQRADEGRTLRVGNSQIGKDDSHGFKVYVGDLAPDVTDNLLIQTFNRRYVS 633
           Q+Y +G++ P  A   R       +  +DDS  + ++VGDLA DVTD +L +TF  RY S
Sbjct: 125 QTY-NGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNS 183

Query: 634 VTNAHVVTDKATGCSKGYGFLSFADECEQKRAIAEMDGQYCSTKRMRVKPPHDKRTVAVR 813
           V  A VV D+ TG +KGYGF+ F DE EQ RA+ EM+G +CS++ MR+ P  +K T    
Sbjct: 184 VKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSG-- 241

Query: 814 QPQHPQATYQSTPGAQNESDP 876
             Q  + +YQ+ PG QNE+DP
Sbjct: 242 SQQFSKTSYQNPPGTQNENDP 262


>gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
           gi|108709397|gb|ABF97192.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|215678704|dbj|BAG95141.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 402

 Score =  117 bits (293), Expect = 3e-24
 Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 5/162 (3%)
 Frame = +1

Query: 406 RPPSQGITPYMQHQLQQSYASGSSQPQRADEGRTLRVGNSQIGK-----DDSHGFKVYVG 570
           +P   G   +  H + +    G +     +  +  ++  +  G      DD   + ++VG
Sbjct: 106 QPEGYGFIEFGSHAIAEQVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVG 165

Query: 571 DLAPDVTDNLLIQTFNRRYVSVTNAHVVTDKATGCSKGYGFLSFADECEQKRAIAEMDGQ 750
           DLA DVTD +L  TF   Y SV  A VV D++TG SKGYGF+ F D  EQ RA+ EM+GQ
Sbjct: 166 DLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQ 225

Query: 751 YCSTKRMRVKPPHDKRTVAVRQPQHPQATYQSTPGAQNESDP 876
           YCS++ MR+ P  +K+ +  +  Q P ATYQ+T G  ++SDP
Sbjct: 226 YCSSRPMRIGPASNKKNIGGQ--QQPSATYQNTQGTDSDSDP 265


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