BLASTX nr result
ID: Papaver22_contig00026203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00026203
(739 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 75 9e-26
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Gl... 72 3e-23
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Gl... 72 6e-23
ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|2... 63 1e-21
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp.... 64 3e-21
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 75.5 bits (184), Expect(3) = 9e-26
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = -1
Query: 397 KTLLHDEVKSGARLSSE--LGTDSFRINNKAIGEVEGTGDELLSAVELAAV-EENETPAF 227
KTLL DEV S +R+S E G D F I+ K +GE+EG DEL++ ELAA EE ET +F
Sbjct: 177 KTLLRDEVISRSRISHEGSTGNDGFTIS-KTVGEIEGRHDELINEAELAAAAEEKETHSF 235
Query: 226 AVDPA*VENAQQRCLPCTL 170
VDPA VEN +QRCLP L
Sbjct: 236 EVDPAQVENVKQRCLPNAL 254
Score = 57.0 bits (136), Expect(3) = 9e-26
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = -3
Query: 605 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 510
MIDFI+AST+NYGK+KLVLK N YFVESPFP+
Sbjct: 143 MIDFIHASTANYGKVKLVLKKNRYFVESPFPE 174
Score = 30.8 bits (68), Expect(3) = 9e-26
Identities = 14/18 (77%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -3
Query: 170 NYPMLE-YDFRNNTVDQD 120
NYPMLE YDFRN+TV+ D
Sbjct: 255 NYPMLEEYDFRNDTVNPD 272
>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
Length = 768
Score = 72.4 bits (176), Expect(3) = 3e-23
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = -1
Query: 397 KTLLHDEVKSGARLSSE-LGTDSFRINNKAIGEVEGTGDELLSAVELAAV-EENETPAFA 224
KTLL DE S +RL SE + D F I+ KA GE+EGT DELL+ E+AAV EE E +F
Sbjct: 175 KTLLRDETISRSRLISENVNGDGFTIS-KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFE 233
Query: 223 VDPA*VENAQQRCLPCTL 170
+DP+ VEN +QRCLP L
Sbjct: 234 IDPSQVENVKQRCLPNAL 251
Score = 51.6 bits (122), Expect(3) = 3e-23
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -3
Query: 605 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 510
MI FI+ ST+NYGK+KLVLK N YF+ESPFP+
Sbjct: 141 MIKFIHDSTANYGKVKLVLKKNRYFIESPFPE 172
Score = 30.8 bits (68), Expect(3) = 3e-23
Identities = 14/18 (77%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -3
Query: 170 NYPMLE-YDFRNNTVDQD 120
NYPMLE YDFRN+TV+ D
Sbjct: 252 NYPMLEEYDFRNDTVNPD 269
>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
Length = 768
Score = 71.6 bits (174), Expect(3) = 6e-23
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = -1
Query: 397 KTLLHDEVKSGARLSSE-LGTDSFRINNKAIGEVEGTGDELLSAVELAAV-EENETPAFA 224
KTLL DE S +R+ SE + D F I+ KA GE+EGT DELL+ E+AAV EE E +F
Sbjct: 175 KTLLRDETISRSRIISENVNGDGFTIS-KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFE 233
Query: 223 VDPA*VENAQQRCLPCTL 170
+DP+ VEN +QRCLP L
Sbjct: 234 IDPSQVENVKQRCLPNAL 251
Score = 51.2 bits (121), Expect(3) = 6e-23
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -3
Query: 605 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 510
M+ FI+ ST+NYGK+KLVLK N YF+ESPFP+
Sbjct: 141 MVKFIHDSTANYGKVKLVLKKNRYFIESPFPE 172
Score = 30.8 bits (68), Expect(3) = 6e-23
Identities = 14/18 (77%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -3
Query: 170 NYPMLE-YDFRNNTVDQD 120
NYPMLE YDFRN+TV+ D
Sbjct: 252 NYPMLEEYDFRNDTVNPD 269
>ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|222846778|gb|EEE84325.1|
predicted protein [Populus trichocarpa]
Length = 803
Score = 63.2 bits (152), Expect(3) = 1e-21
Identities = 41/79 (51%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = -1
Query: 397 KTLLHDEVKSGARLSSEL--GTDSFRINNKAIGEVEGTGDELLSAVELAAV-EENETPAF 227
K LL DEV + AR+ E GT+ F I+ KA GE+ + D LL+ ELAA EE ET +F
Sbjct: 191 KKLLKDEVIAKARIQPESSHGTEGFTIS-KAAGEIGTSHDGLLNEAELAAAAEEKETHSF 249
Query: 226 AVDPA*VENAQQRCLPCTL 170
VDP+ VEN +QRCLP L
Sbjct: 250 EVDPSQVENVKQRCLPNAL 268
Score = 55.5 bits (132), Expect(3) = 1e-21
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = -3
Query: 605 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQESALLYKIYFVSNILVMNLVI 447
MIDFI+ ST+NYGK+KLVLK N YF+ESPF + S +FVS ++LV+
Sbjct: 143 MIDFIHGSTANYGKVKLVLKKNRYFIESPFTEAS-----WFFVSGFPPLSLVL 190
Score = 30.8 bits (68), Expect(3) = 1e-21
Identities = 14/18 (77%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -3
Query: 170 NYPMLE-YDFRNNTVDQD 120
NYPMLE YDFRN+TV+ D
Sbjct: 269 NYPMLEEYDFRNDTVNPD 286
>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316475|gb|EFH46898.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 779
Score = 63.9 bits (154), Expect(3) = 3e-21
Identities = 42/79 (53%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = -1
Query: 397 KTLLHDEVKSGARLSSE--LGTDSFRINNKAIGEVEGTGDELLSAVELAAV-EENETPAF 227
K LL D+V + AR SSE G D F I K GE+E ELL+ ELAA EE ET +F
Sbjct: 188 KRLLSDDVINRARFSSEPYYGGDGFTIG-KTSGELEAGPGELLNEAELAAAAEEKETHSF 246
Query: 226 AVDPA*VENAQQRCLPCTL 170
+DPA VEN +QRCLP L
Sbjct: 247 EIDPAQVENVKQRCLPNAL 265
Score = 55.1 bits (131), Expect(3) = 3e-21
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = -3
Query: 605 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 510
MI+FI+AST+NYGK+KLVLK N YF+ESPFP+
Sbjct: 154 MIEFIHASTANYGKVKLVLKKNRYFIESPFPE 185
Score = 28.9 bits (63), Expect(3) = 3e-21
Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
Frame = -3
Query: 170 NYPMLE-YDFRNNTVDQD 120
NYPMLE YDFRN+ V+ D
Sbjct: 266 NYPMLEEYDFRNDNVNPD 283