BLASTX nr result

ID: Papaver22_contig00026135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026135
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar...    72   1e-10
ref|XP_002865693.1| pentatricopeptide repeat-containing protein ...    72   1e-10
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...    71   2e-10
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10

>ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|15810559|gb|AAL07167.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|332008359|gb|AED95742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +1

Query: 1   HSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 111
           HS+IKL+SKV+KRKI VRDR+RFHHF+DG CSC DYW
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646


>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311528|gb|EFH41952.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 640

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +1

Query: 1   HSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 111
           HS+IKL+SKV+KRKI VRDR+RFHHF+DG CSC DYW
Sbjct: 604 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +1

Query: 1   HSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 111
           HSA KL+SKV+ R+I+VRDR RFHHF+DG CSCNDYW
Sbjct: 709 HSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +1

Query: 1   HSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 111
           HSA KL+SKV+ R+IVVRDR RFHHF+DG CSCNDYW
Sbjct: 657 HSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +1

Query: 1   HSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 111
           HS+IKLVSK++ RKI+VRDR+RFHHFE+G CSC DYW
Sbjct: 593 HSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629


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