BLASTX nr result

ID: Papaver22_contig00026014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026014
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    61   1e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    59   3e-07
ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002308782.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +1

Query: 7   PSWCLDDELYSCKDMEVGVLGEDLYLLFNATSRKGNIDLWVMTDYGVTDSWTKIFS--LS 180
           P+W  D++L     ++ GVL   L  + N       IDLWVM +YGV +SW K+FS  LS
Sbjct: 255 PNWS-DNQLNF--QVDAGVLEGRLCAMCNCGHEC--IDLWVMEEYGVKESWIKLFSFRLS 309

Query: 181 KDKINFYRLLPLHYLNKNREILLQGLRFEVED-ALVSYNPKSGRLVALDIPGMPKHFNAT 357
           K   N   L PL Y +K+RE +L     EV D  LV Y+     +  + + G P+ F A 
Sbjct: 310 KSMSNLMFLRPLCY-SKDREKML----LEVNDHKLVWYDWNKTSVRTVKVKGGPRSFGAA 364

Query: 358 TFVGSLASLNSG 393
             VGSL  L+ G
Sbjct: 365 MCVGSLVPLDDG 376


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +1

Query: 49  MEVGVLGEDLYLLFNATSRKGNIDLWVMTDYGVTDSWTKIFSLSK-DKINFYR-LLPLHY 222
           +++GVL   L  L N    +  +D+W+M +YGV +SWTK+FS+++ + I F R L PL Y
Sbjct: 255 IDLGVLRGCLCFLANFLGER--VDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAY 312

Query: 223 LNKNREILLQGLRFEVEDALVSYNPKSGRLVALDIPGMPKHFNATTFVGSLASLN 387
                E+L++    +    L  Y+ K  + V   IPG+P  F A TFV SL S++
Sbjct: 313 SKSGDEVLIEHDNLD----LCWYDLKR-KQVKNRIPGIPYSFEADTFVESLISVS 362


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = +1

Query: 46  DMEVGVLGEDLYLLFNATSRKGNIDLWVMTDYGVTDSWTKIFSLSK-DKINFYR-LLPLH 219
           +M VGVL   L LL  A +R   +D+WVM +Y V +SW+K+FS+++ + I   R L PL 
Sbjct: 247 NMGVGVLQGCLSLL--AYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLA 304

Query: 220 YLNKNREILLQGLRFEVEDALVSYNPKSGRLVALDIPGMPKHFNATTFVGSLASLNS 390
           Y     E+L++         L  Y+ K   +V + I G+P  F A   VGSL  LN+
Sbjct: 305 YSKSGNEVLIEHDNVN----LFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVPLNA 357


>ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|222867154|gb|EEF04285.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
 Frame = +1

Query: 55  VGVLGEDLYLLFNATSRKGNIDLWVMTDYGVTDSWTKIFSLSKDKINFYR-----LLPLH 219
           +GVL + L L   A+S   N+++WVM +YG+ DSW K+F L K     Y      L PL 
Sbjct: 301 LGVLRQCLSL---ASSSVHNVEIWVMKEYGMKDSWVKLFLLEKSSSLCYSTVPYDLAPLA 357

Query: 220 YL---NKNREILLQGLRFEVEDALVSYNPKSGRLVALDIPGMPKHFNATTFVGSLAS 381
           Y+   N + ++LL+GL    + +L+ Y+ K      + I G P  +    FVGSL S
Sbjct: 358 YVKDNNDDHKVLLKGL---PDQSLIWYDLKLKTYEHVQIHGAPWLYQPYIFVGSLVS 411


>ref|XP_002308782.1| predicted protein [Populus trichocarpa] gi|222854758|gb|EEE92305.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/88 (35%), Positives = 53/88 (60%)
 Frame = +1

Query: 79  YLLFNATSRKGNIDLWVMTDYGVTDSWTKIFSLSKDKINFYRLLPLHYLNKNREILLQGL 258
           +L   A  R  + D+W+M +YGV +SW+K+FS+S++ +++  + PL Y  + RE+LL+  
Sbjct: 173 FLCVFAKVRDWSADVWIMKEYGVKESWSKVFSISRNVLSYDSVRPLGYSRRGREVLLE-- 230

Query: 259 RFEVEDALVSYNPKSGRLVALDIPGMPK 342
               E  LV Y  ++ R+V + I G  K
Sbjct: 231 --LDEKRLVWYGMETRRVVDVVIQGRKK 256


Top