BLASTX nr result

ID: Papaver22_contig00025946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025946
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    72   5e-11
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]    72   5e-11
ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens ...    71   1e-10
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752...    71   1e-10
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...    70   1e-10

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
 Frame = -2

Query: 421  IEVGKEKTNDIQF-----RLLPTPVGQRTFDSDSDKFVKEIQTSDKGRC--EDLKNFVAK 263
            I VG +KT D+QF      ++ T  G +    D D+  +E +  D+      D +NFV +
Sbjct: 750  IMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNR 809

Query: 262  VQNKW---RVSPSPFSFHRVYKEEEFCGVLPSEAPAVFGLPLLSLVGLADLPFRVINLKD 92
            V + W   +       F +  +E  F GV P +A A        LV L + PF VI L +
Sbjct: 810  VNDLWGQPQFKGLDLEFDQPLRELGFHGV-PHKASAFIVPTSSCLVELIETPFLVITLSE 868

Query: 91   IEIVNLARLRPGK--IDMTVVFKDFSRDVLQI 2
            IEIVNL R+  G+   DMT+VFKDF RDVL+I
Sbjct: 869  IEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI 900


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
 Frame = -2

Query: 421  IEVGKEKTNDIQF-----RLLPTPVGQRTFDSDSDKFVKEIQTSDKGRC--EDLKNFVAK 263
            I VG +KT D+QF      ++ T  G +    D D+  +E +  D+      D +NFV +
Sbjct: 698  IMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNR 757

Query: 262  VQNKW---RVSPSPFSFHRVYKEEEFCGVLPSEAPAVFGLPLLSLVGLADLPFRVINLKD 92
            V + W   +       F +  +E  F GV P +A A        LV L + PF VI L +
Sbjct: 758  VNDLWGQPQFKGLDLEFDQPLRELGFHGV-PHKASAFIVPTSSCLVELIETPFLVITLSE 816

Query: 91   IEIVNLARLRPGK--IDMTVVFKDFSRDVLQI 2
            IEIVNL R+  G+   DMT+VFKDF RDVL+I
Sbjct: 817  IEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI 848


>ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens subsp. patens]
            gi|162664770|gb|EDQ51477.1| FACT complex subunit
            [Physcomitrella patens subsp. patens]
          Length = 1065

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
 Frame = -2

Query: 421  IEVGKEKTNDIQF-----RLLPTPVGQRTFDSDSDKFVKEIQTSDKGRC--EDLKNFVAK 263
            I VG +KT D+QF      ++ T  G R    D D+  +E Q  D+     ++ + FV +
Sbjct: 744  IMVGTKKTKDVQFYVEVMEVVQTLGGSRRSMMDPDEIEEEQQERDRRNKINKEFEAFVKR 803

Query: 262  VQNKWRVSP---SPFSFHRVYKEEEFCGVLPSEAPAVFGLPLLSLVGLADLPFRVINLKD 92
            +   W   P       F   ++E  F GV P+++ A     +  LV L + PF V++L D
Sbjct: 804  MAELWDQPPWRELDLEFDIPFRELGFHGV-PNKSSAFIVPTVNCLVELIETPFLVVSLND 862

Query: 91   IEIVNLARLRPGK--IDMTVVFKDFSRDVLQI 2
            IEIVNL R+  G+   DM +VFKDF R+VL+I
Sbjct: 863  IEIVNLERVGLGQKAFDMAIVFKDFKREVLRI 894


>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
            gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16; AltName:
            Full=Global transcription factor group C protein 102
            gi|24021798|gb|AAN41252.1| global transcription factor
            group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
            complex subunit SPT16 isoform 1 [Zea mays]
            gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
            isoform 2 [Zea mays]
          Length = 1055

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
 Frame = -2

Query: 421  IEVGKEKTNDIQFRL-----LPTPVGQRTFDSDSDKFVKEIQTSD-KGRCE-DLKNFVAK 263
            I VG +KT D+QF +     + T  G R    D D+  +E +  D K R   D +NFV K
Sbjct: 734  IMVGNKKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRINMDFQNFVNK 793

Query: 262  VQNKW---RVSPSPFSFHRVYKEEEFCGVLPSEAPAVFGLPLLSLVGLADLPFRVINLKD 92
            V + W   +       F    +E  F GV P +A A        LV L + PF V++L +
Sbjct: 794  VNDHWSQPQFKGLDLEFDVPLRELGFHGV-PYKASAFIIPTSTCLVELIETPFLVVSLSE 852

Query: 91   IEIVNLARLRPG--KIDMTVVFKDFSRDVLQI 2
            IEIVNL R+  G    DM +VFKDF +DVL+I
Sbjct: 853  IEIVNLERVGFGTKNFDMAIVFKDFKKDVLRI 884


>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
            gi|241920009|gb|EER93153.1| hypothetical protein
            SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
 Frame = -2

Query: 421  IEVGKEKTNDIQFRL-----LPTPVGQRTFDSDSDKFVKEIQTSD-KGRCE-DLKNFVAK 263
            I VG +KT D+QF +     + T  G R    D D+  +E +  D K R   D +NFV K
Sbjct: 733  IMVGNKKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRINMDFQNFVNK 792

Query: 262  VQNKW---RVSPSPFSFHRVYKEEEFCGVLPSEAPAVFGLPLLSLVGLADLPFRVINLKD 92
            V + W   +       F    +E  F GV P +A A        LV L + PF V++L +
Sbjct: 793  VNDHWSQPQFKGLDLEFDVPLRELGFYGV-PYKASAFIIPTSTCLVELIENPFLVVSLSE 851

Query: 91   IEIVNLARLRPG--KIDMTVVFKDFSRDVLQI 2
            IEIVNL R+  G    DM +VFKDF +DVL+I
Sbjct: 852  IEIVNLERVGFGTKNFDMAIVFKDFKKDVLRI 883


Top