BLASTX nr result
ID: Papaver22_contig00025910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00025910
(1609 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 43 2e-13
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 42 6e-13
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 56 9e-11
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t... 42 2e-10
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra... 36 2e-09
>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
Length = 1558
Score = 42.7 bits (99), Expect(4) = 2e-13
Identities = 29/78 (37%), Positives = 32/78 (41%)
Frame = +1
Query: 565 FLFSFEARNKYFLFTVLRSPLVQXXXXXXXXXXXXXXXXXXXXLVWNFPLEKFQIHWIHI 744
FLFSFEAR KYF P VQ L P +KF +H I
Sbjct: 1115 FLFSFEARCKYFKLEAFGQPQVQPHISHNGSGTVSDRRLGPGGL----PRKKFLVHRDRI 1170
Query: 745 LNSAVQKIDAHVHQKVTL 798
L SA Q +D H KV L
Sbjct: 1171 LESAAQMMDLHASNKVVL 1188
Score = 37.0 bits (84), Expect(4) = 2e-13
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 852 FFTVVSHEFQKLGLGVWRED*SFTSSGKIVEPGCVIASS--RLSPHP*SATMELSNG 1016
F+T+V EFQK GLG+WRED S + +E + S L P P S+ + S G
Sbjct: 1206 FYTLVCQEFQKSGLGMWREDASSFTLKTNMEAEDIGTHSFYGLFPRPWSSMQDTSGG 1262
Score = 32.7 bits (73), Expect(4) = 2e-13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 773 LTSTKRLHLEVGCDEEVRIGLGPTLEF 853
L ++ ++ LEV DEEV GLGPTLEF
Sbjct: 1180 LHASNKVVLEVEYDEEVGTGLGPTLEF 1206
Score = 29.3 bits (64), Expect(4) = 2e-13
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 453 VPVCPVPQSEIVSRKLAENLDQQMVSS 533
+ V VPQ E VS KL E L+QQM S
Sbjct: 1068 ITVPSVPQFEFVSSKLTEKLEQQMRDS 1094
>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
Length = 1557
Score = 42.0 bits (97), Expect(4) = 6e-13
Identities = 28/78 (35%), Positives = 31/78 (39%)
Frame = +1
Query: 565 FLFSFEARNKYFLFTVLRSPLVQXXXXXXXXXXXXXXXXXXXXLVWNFPLEKFQIHWIHI 744
FLFSFEAR KYF P VQ P +KF +H I
Sbjct: 1116 FLFSFEARCKYFRLAAFGQPQVQPSHNGSGTVSDRRLSPG------GLPRKKFLVHRDRI 1169
Query: 745 LNSAVQKIDAHVHQKVTL 798
L SA Q +D H KV L
Sbjct: 1170 LESAAQMMDLHASNKVVL 1187
Score = 36.2 bits (82), Expect(4) = 6e-13
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 852 FFTVVSHEFQKLGLGVWRE-D*SFTSSGKI-VEPGCVIASSRLSPHP*SATMELSNGQMG 1025
F+T+V EFQK GL +WRE D SFT + E V + L P P S+ + S G +
Sbjct: 1205 FYTLVCQEFQKSGLAMWREDDSSFTLKTNLQAEEIGVHSFYGLFPRPWSSMQDTSGG-IQ 1263
Query: 1026 ASGCTRNY 1049
S T+N+
Sbjct: 1264 FSEVTKNF 1271
Score = 32.7 bits (73), Expect(4) = 6e-13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 773 LTSTKRLHLEVGCDEEVRIGLGPTLEF 853
L ++ ++ LEV DEEV GLGPTLEF
Sbjct: 1179 LHASNKVVLEVEYDEEVGTGLGPTLEF 1205
Score = 29.3 bits (64), Expect(4) = 6e-13
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 453 VPVCPVPQSEIVSRKLAENLDQQMVSS 533
+ V VPQ E VS KL E L+QQM S
Sbjct: 1069 ITVPSVPQIEFVSSKLTEKLEQQMRDS 1095
>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
Length = 1575
Score = 55.8 bits (133), Expect(3) = 9e-11
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = +3
Query: 852 FFTVVSHEFQKLGLGVWRED*SFTSSGKIVE--PGCVIASSRLSPHP*SATMELSNG 1016
F+T+V HEFQK GLG+WRED + ++S K ++ G V++ S L P P S+T+ SNG
Sbjct: 1222 FYTLVCHEFQKTGLGMWREDYTSSTSCKSLQAGSGMVVSPSGLFPRPWSSTLSTSNG 1278
Score = 30.4 bits (67), Expect(3) = 9e-11
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = +1
Query: 565 FLFSFEARNKYFLFTVLRSPLVQXXXXXXXXXXXXXXXXXXXXLVWNFPLEKFQIHWIHI 744
FLF FEAR KYF Q + P +KF + I
Sbjct: 1130 FLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSDRRHNAG---SLPRKKFLVCRDRI 1186
Query: 745 LNSAVQKIDAHVHQKVTL 798
L+SA Q ++ H QKV L
Sbjct: 1187 LDSAAQMMNLHACQKVVL 1204
Score = 27.3 bits (59), Expect(3) = 9e-11
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 453 VPVCPVPQSEIVSRKLAENLDQQM 524
VPV +P++E V+ KL E L+QQM
Sbjct: 1085 VPV--IPENEFVNSKLTEKLEQQM 1106
>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
ligase 4 gi|7413563|emb|CAB86042.1| putative protein
[Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
Length = 1502
Score = 42.0 bits (97), Expect(4) = 2e-10
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 852 FFTVVSHEFQKLGLGVWRED*SFTSSGKIVEPGCVIASSRLSPHP*SATMELSN 1013
F+T+VS FQ LG+WR D SF + G + +SS L P P S T S+
Sbjct: 1158 FYTLVSRAFQNPDLGMWRNDCSFIVGKPVEHSGVLASSSGLFPRPWSGTSTTSD 1211
Score = 32.3 bits (72), Expect(4) = 2e-10
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 453 VPVCPVPQSEIVSRKLAENLDQQMVSSW 536
V V PVP SE VS KL E L+QQ+ S+
Sbjct: 1019 VQVRPVPHSEFVSSKLTEKLEQQLRDSF 1046
Score = 29.3 bits (64), Expect(4) = 2e-10
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 773 LTSTKRLHLEVGCDEEVRIGLGPTLEF 853
L +++ +EV EEV GLGPTLEF
Sbjct: 1132 LYGNQKVVIEVEYSEEVGTGLGPTLEF 1158
Score = 28.1 bits (61), Expect(4) = 2e-10
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +1
Query: 568 LFSFEARNKYFLFTVLRSPLVQXXXXXXXXXXXXXXXXXXXXLVWNFPLEKFQIHWIHIL 747
LFSFEA++KYF S Q + + P +KF +IL
Sbjct: 1067 LFSFEAKSKYFRLAAFGS---QKIRHHPQHLSSSNVHGEARPVTGSLPRKKFLACRENIL 1123
Query: 748 NSAVQKIDAHVHQKVTL 798
SA + ++ + +QKV +
Sbjct: 1124 ESAAKMMELYGNQKVVI 1140
>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
[Arabidopsis lyrata subsp. lyrata]
Length = 1509
Score = 35.8 bits (81), Expect(4) = 2e-09
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 852 FFTVVSHEFQKLGLGVWRED*SFTSSGKIVEPGCVIASSRLSPHP*SATMELSN 1013
F+T+VS FQ LG+WR D S G + +SS L P P S T S+
Sbjct: 1165 FYTLVSRAFQNPDLGMWRNDCSSFVGKPGEHSGVLASSSGLFPRPWSGTSTTSD 1218
Score = 33.1 bits (74), Expect(4) = 2e-09
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 453 VPVCPVPQSEIVSRKLAENLDQQMVSSW 536
V V PVP SE VS KL E L+QQ+ S+
Sbjct: 1026 VQVLPVPHSEFVSSKLTEKLEQQLRDSF 1053
Score = 29.6 bits (65), Expect(4) = 2e-09
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +1
Query: 565 FLFSFEARNKYFLFTVLRSPLVQXXXXXXXXXXXXXXXXXXXXLVWNFPLEKFQIHWIHI 744
FLFSFE ++KYF S Q + + P +KF + I
Sbjct: 1073 FLFSFEVKSKYFRLAAFGS---QKVHHHPQHLSSSNVQGDGRPVTGSLPRKKFLVCREKI 1129
Query: 745 LNSAVQKIDAHVHQKVTL 798
L SA + ++ + +QKV +
Sbjct: 1130 LESAAKMMELYGNQKVVI 1147
Score = 29.3 bits (64), Expect(4) = 2e-09
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 773 LTSTKRLHLEVGCDEEVRIGLGPTLEF 853
L +++ +EV EEV GLGPTLEF
Sbjct: 1139 LYGNQKVVIEVEYSEEVGTGLGPTLEF 1165