BLASTX nr result

ID: Papaver22_contig00025778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025778
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV65494.1| photosystem II CP47 chlorophyll apoprotein, parti...    61   1e-07
gb|ABV65365.1| photosystem II CP47 chlorophyll apoprotein, parti...    61   1e-07
gb|AAF72603.1| photosystem II apoprotein [Ephedra tweediana]           60   2e-07
gb|AFA27408.1| photosystem II CP47 chlorophyll apoprotein [Thamn...    60   2e-07
ref|YP_002519979.1| photosystem II 47 kDa protein (chloroplast) ...    60   2e-07

>gb|ABV65494.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
           [Helianthemum canum]
          Length = 487

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = +3

Query: 6   NPAFWSYEGVAEGHILFSCL*FLAVIWHWVCWD 104
           NP FWSYEGVA  HI+FS L FLA IWHWV WD
Sbjct: 66  NPGFWSYEGVAAAHIVFSGLCFLAAIWHWVYWD 98


>gb|ABV65365.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
           [Anisoptera marginata]
          Length = 480

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = +3

Query: 6   NPAFWSYEGVAEGHILFSCL*FLAVIWHWVCWD 104
           NP FWSYEGVA  HI+FS L FLA IWHWV WD
Sbjct: 59  NPGFWSYEGVAAAHIVFSGLCFLAAIWHWVYWD 91


>gb|AAF72603.1| photosystem II apoprotein [Ephedra tweediana]
          Length = 462

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = +3

Query: 6   NPAFWSYEGVAEGHILFSCL*FLAVIWHWVCWDPRNFIYP 125
           NP FWSYEGVA  HI+FS L FL+ IWHWV WD   F  P
Sbjct: 78  NPGFWSYEGVAGAHIVFSGLCFLSAIWHWVYWDLEIFTDP 117


>gb|AFA27408.1| photosystem II CP47 chlorophyll apoprotein [Thamnochortus insignis]
          Length = 527

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = +3

Query: 6   NPAFWSYEGVAEGHILFSCL*FLAVIWHWVCWD 104
           NP  WSYEGVA GHI+FS L FLA IWHWV WD
Sbjct: 106 NPGIWSYEGVAGGHIVFSGLCFLAAIWHWVYWD 138


>ref|YP_002519979.1| photosystem II 47 kDa protein (chloroplast) [Ephedra equisetina]
           gi|220983580|dbj|BAH11347.1| photosystem II 47 kDa
           protein (chloroplast) [Ephedra equisetina]
          Length = 508

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = +3

Query: 6   NPAFWSYEGVAEGHILFSCL*FLAVIWHWVCWDPRNFIYP 125
           NP FWSYEGVA  HI+FS L FL+ IWHWV WD   F  P
Sbjct: 87  NPGFWSYEGVAGAHIVFSGLCFLSAIWHWVYWDLEIFTDP 126


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