BLASTX nr result

ID: Papaver22_contig00025719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025719
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...   113   1e-22
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   112   2e-22
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              112   2e-22
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   110   6e-22
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   105   2e-20

>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1622

 Score =  113 bits (282), Expect = 1e-22
 Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 6/164 (3%)
 Frame = +1

Query: 1    EIIYSQKDYQVDK-LDIFNTLST---QPSYKDARKVSPKKGDKWG-KYSFADGFAIPSTP 165
            ++IYS+K +QV K +D++  L     +P+ K    +     DK G ++   +G+A+    
Sbjct: 1277 DVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYAL---- 1332

Query: 166  VKSESIPKEVGNASPSENDILDMVFQLQNILYKYPVGHSLNEDEKSTMIYALRYHPRVNE 345
             K     K +     + NDI  + F  + IL KY +   L+E ++STM+  L +HP  +E
Sbjct: 1333 -KEGKQWKTILRNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSE 1391

Query: 346  KVGSGLREIKVGYHPKY-NSRCFNVVRTDGTVEDFSYRKCVFEA 474
            K G G ++IKVG+HPKY +SRCF+++RTDGTVEDFSYRKC+  A
Sbjct: 1392 KFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGA 1435


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  112 bits (279), Expect = 2e-22
 Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
 Frame = +1

Query: 1    EIIYSQKDYQVDKL-DIFNTLSTQPSYKDAR----------KVSPKKGDKWGKYSFADGF 147
            +I+YS K +++ +  DI+  L +Q S  +            + + K G    +  +A+G 
Sbjct: 1303 DILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCG---AQLVYANGD 1359

Query: 148  AIPSTPVKSESIPKEVGNASPSENDILDMVFQLQNILYKYPVGHSLNEDEKSTMIYALRY 327
            +        E I K V  +  S NDI  +  +L+ IL KYP+ H L+E +K+T++ AL +
Sbjct: 1360 SASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYF 1419

Query: 328  HPRVNEKVGSGLREIKVGYHPKY-NSRCFNVVRTDGTVEDFSYRKCVFEAAKQISIHCAE 504
            HPR +EK+G G + IKV YH KY N+RCF++VRTDGT EDFSY KCV  A + I    A 
Sbjct: 1420 HPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRAR 1479

Query: 505  SIMKRF 522
            S   R+
Sbjct: 1480 SYQSRW 1485


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  112 bits (279), Expect = 2e-22
 Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
 Frame = +1

Query: 1    EIIYSQKDYQVDKL-DIFNTLSTQPSYKDAR----------KVSPKKGDKWGKYSFADGF 147
            +I+YS K +++ +  DI+  L +Q S  +            + + K G    +  +A+G 
Sbjct: 1161 DILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCG---AQLVYANGD 1217

Query: 148  AIPSTPVKSESIPKEVGNASPSENDILDMVFQLQNILYKYPVGHSLNEDEKSTMIYALRY 327
            +        E I K V  +  S NDI  +  +L+ IL KYP+ H L+E +K+T++ AL +
Sbjct: 1218 SASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYF 1277

Query: 328  HPRVNEKVGSGLREIKVGYHPKY-NSRCFNVVRTDGTVEDFSYRKCVFEAAKQISIHCAE 504
            HPR +EK+G G + IKV YH KY N+RCF++VRTDGT EDFSY KCV  A + I    A 
Sbjct: 1278 HPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRAR 1337

Query: 505  SIMKRF 522
            S   R+
Sbjct: 1338 SYQSRW 1343


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  110 bits (275), Expect = 6e-22
 Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
 Frame = +1

Query: 1    EIIYSQKDYQVDK-LDIFNTLSTQPSYK--DARKVSPKKGDKWGKYS----FADGFAIPS 159
            +I+YS K ++++K +D++N L  Q + +  + +  S  K     KYS      +G +   
Sbjct: 1282 DILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQLMLKNGGSTIK 1341

Query: 160  TPVKSESIPKEVGNASPSENDILDMVFQLQNILYKYPVGHSLNEDEKSTMIYALRYHPRV 339
               + +S+ K +     + NDI  + F L+ IL+KY +   LNE +KST++ AL +HP  
Sbjct: 1342 GLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHR 1401

Query: 340  NEKVGSGLREIKVGYHPKY-NSRCFNVVRTDGTVEDFSYRKCVFEAAKQISIHCAESIMK 516
            +EK+G G ++IKVG H KY N+RCF ++R+DGT EDFSY KCV  A + I+ H  +    
Sbjct: 1402 DEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQS 1461

Query: 517  RFKND 531
            ++  +
Sbjct: 1462 KWMQE 1466


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  105 bits (263), Expect = 2e-20
 Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
 Frame = +1

Query: 1    EIIYSQKDYQVDK-LDIFNTLSTQPSYKDARK------VSPKKGDKWG-KYSFADGFAIP 156
            +I+YS K  +  K +D++N L +Q    +             K DK G ++    G   P
Sbjct: 1315 DIVYSGKGLEFSKPVDVYNLLGSQMISTEQNTEFGVLDAQIYKSDKCGAQFLHKFGGCGP 1374

Query: 157  STPVKSESIPKEVGNASPSENDILDMVFQLQNILYKYPVGHSLNEDEKSTMIYALRYHPR 336
                  E IP+       + +DI  M + ++ IL KY V   LNE +KS ++  L +HPR
Sbjct: 1375 KGFKVKEGIPRSFLRRLLTYDDIQRMSYTVRKILNKYSVDQQLNESDKSVLMMTLYFHPR 1434

Query: 337  VNEKVGSGLREIKVGYHPKY-NSRCFNVVRTDGTVEDFSYRKCVFEAAKQISIHCAESIM 513
             +EK+G G ++IKV  HP+Y ++RCF++VRTDGT+EDFSYRKC+  A + I+   A+   
Sbjct: 1435 RDEKIGIGAKDIKVINHPEYQDTRCFSLVRTDGTIEDFSYRKCLHNALEIIAPQRAKRYC 1494

Query: 514  KRF 522
            +++
Sbjct: 1495 EKY 1497


Top