BLASTX nr result

ID: Papaver22_contig00025590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025590
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     99   1e-18
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     99   1e-18
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    98   2e-18
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    96   7e-18
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    92   1e-16

>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 83/258 (32%), Positives = 120/258 (46%)
 Frame = +3

Query: 6   LPVKSLMIFKSVCKQWLSVISHPSFVNNHIRRQNLSKIHGFFFQKPWRTAXXXXXXXXXX 185
           LP+K+L+ FK V K+WLS+I++P F N  I+  +   I GFF   P              
Sbjct: 45  LPIKTLLRFKRVSKRWLSLITNPDFSNRIIKSNHPLPISGFFLHSPRAIKYSF------- 97

Query: 186 XXGTRIEEEDDSRAPTPEAIASADRCFKALNFDKSCPKPGFHVPPTVEHGMKISQSCNGL 365
                +++EDD+   T + I+S+      L F               +  M I QS NGL
Sbjct: 98  ---VSLDDEDDA---TNQRISSS----LPLWFTDH------------QSDMIIMQSTNGL 135

Query: 366 LCCTRLTEVDYGIEVPGIFTTHAYIYNPTTRKYRILPPSPFRDVVRDDCCFEVCSISLAF 545
           L C               F T+ Y+YNPTT++Y +LP                 ++SLAF
Sbjct: 136 LLCK------CSCASSNHFNTNYYVYNPTTKQYTLLPQITGH-----------IALSLAF 178

Query: 546 DPIKSPDHYQVVCIWKDIVNRYDMEYMGDDYFELSYYIEIYSSKTNSWRKLISSSLNPFR 725
           DP KSP HY+V C    +  R +         EL Y+IE+YSS    WR+++    +P  
Sbjct: 179 DPSKSP-HYKVFC----LRGRSNNSVSSASDSEL-YHIEVYSSNEGLWRRVVPVLTSP-- 230

Query: 726 AGFRSFTKSGVYWNGSLH 779
           + F  FT S V+WNG++H
Sbjct: 231 STFIEFTYS-VFWNGAVH 247


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 82/258 (31%), Positives = 116/258 (44%)
 Frame = +3

Query: 6   LPVKSLMIFKSVCKQWLSVISHPSFVNNHIRRQNLSKIHGFFFQKPWRTAXXXXXXXXXX 185
           LP+K+L+ FK V K+WLS+I++P F N  I+  +   I GFF   P              
Sbjct: 45  LPIKTLLRFKRVSKRWLSLITNPDFSNRVIKSNHPLPISGFFLHSP----------RAFK 94

Query: 186 XXGTRIEEEDDSRAPTPEAIASADRCFKALNFDKSCPKPGFHVPPTVEHGMKISQSCNGL 365
                +++EDD                 A N   S   P +      +  M I QS NGL
Sbjct: 95  YSFVSLDDEDD-----------------ATNQRVSSSLPLWFTDHQTD--MIIMQSTNGL 135

Query: 366 LCCTRLTEVDYGIEVPGIFTTHAYIYNPTTRKYRILPPSPFRDVVRDDCCFEVCSISLAF 545
           L C               F T+ Y+YNPTT++Y +LP                 ++SLAF
Sbjct: 136 LLCK------CSCASSNHFNTNYYVYNPTTKQYTLLPQITGH-----------IALSLAF 178

Query: 546 DPIKSPDHYQVVCIWKDIVNRYDMEYMGDDYFELSYYIEIYSSKTNSWRKLISSSLNPFR 725
           DP KSP HY+V C    +  R +         EL Y+IE+YSS    WR+++    +P  
Sbjct: 179 DPSKSP-HYKVFC----LRGRSNNSVSSASDSEL-YHIEVYSSNEGLWRRVVPVLTSP-- 230

Query: 726 AGFRSFTKSGVYWNGSLH 779
           + F  FT S V+WNG++H
Sbjct: 231 STFIEFTYS-VFWNGAVH 247


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 84/258 (32%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
 Frame = +3

Query: 9   PVKSLMIFKSVCKQWLSVISHPSFVNNHIRRQNLSKIHGFFFQKPWRTAXXXXXXXXXXX 188
           PVK L+ F+SV K+WLS+IS P F + H RR + S + G     P               
Sbjct: 47  PVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSAS-VPGVLLGLPNSNFDFISF------ 99

Query: 189 XGTRIEEEDDSRAPTPEAIASADRCFKALNFDKSCPKPGFHVPPTVEHGMKISQSCNGLL 368
                   D+ +A  P          ++L+F                 G+K+ Q CNGLL
Sbjct: 100 --------DEKKASEPP--------LRSLDFIGD------------PLGVKVLQVCNGLL 131

Query: 369 CCTRLTEVDYGIEVPGIFTTHAYIYNPTTRKYRILPPSPFRDVVRDDCCFEVCSISLAFD 548
           CC+ +  +          + + YI N  TR++ +LPP P     RD     V  I+LAFD
Sbjct: 132 CCSTVRSLG--------TSRNYYICNLATRRFSVLPP-PCSSGGRD----TVFGINLAFD 178

Query: 549 PIKSPDHYQVVCIWKDIVNRYDMEYMGDDYFELSYY-IEIYSSKTNSWRKLISSSLNPFR 725
           P KSP +Y V+C+    V+             +S+Y IEIYSS T  WR     S  PFR
Sbjct: 179 PSKSP-YYSVICVRSCEVS-------------ISHYQIEIYSSGTGDWR----LSGKPFR 220

Query: 726 AGFRSFTKSGVYWNGSLH 779
           A F      GV+WNG++H
Sbjct: 221 APFDMVFYDGVFWNGAVH 238


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 81/258 (31%), Positives = 120/258 (46%)
 Frame = +3

Query: 6   LPVKSLMIFKSVCKQWLSVISHPSFVNNHIRRQNLSKIHGFFFQKPWRTAXXXXXXXXXX 185
           LP+K+L+ FK V K+WLS+I++P F N  I+  +   I GFF   P              
Sbjct: 45  LPIKTLLRFKRVSKRWLSLITNPDFSNRIIKSNHPLPISGFFLHSPRAIKYSF------- 97

Query: 186 XXGTRIEEEDDSRAPTPEAIASADRCFKALNFDKSCPKPGFHVPPTVEHGMKISQSCNGL 365
                +++EDD+   T + I+S+               P +      +  M I QS NGL
Sbjct: 98  ---VSLDDEDDA---TNQRISSS--------------LPLWFTDHQTD--MIIMQSTNGL 135

Query: 366 LCCTRLTEVDYGIEVPGIFTTHAYIYNPTTRKYRILPPSPFRDVVRDDCCFEVCSISLAF 545
           L C               F T+ Y+YNPTT++Y +LP                 ++SLAF
Sbjct: 136 LLC------QCSCASSNHFNTNYYVYNPTTKQYTLLPQITGH-----------IALSLAF 178

Query: 546 DPIKSPDHYQVVCIWKDIVNRYDMEYMGDDYFELSYYIEIYSSKTNSWRKLISSSLNPFR 725
           DP KSP HY+V C    +  R +         EL Y+IE+YSS    WR++  +  +P  
Sbjct: 179 DPSKSP-HYKVFC----LRGRSNNSVSSASDSEL-YHIEVYSSNEGLWRRVDPALTSP-- 230

Query: 726 AGFRSFTKSGVYWNGSLH 779
           + F  F+ S V+WNG++H
Sbjct: 231 STFIEFSYS-VFWNGAVH 247


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 81/262 (30%), Positives = 116/262 (44%), Gaps = 4/262 (1%)
 Frame = +3

Query: 6   LPVKSLMIFKSVCKQWLSVISHPSFVNNH-IRRQNLSKIHGFFFQKPWRTAXXXXXXXXX 182
           LP++SL+ FKSV K+WLS+IS+P+F +   I         G FF +P             
Sbjct: 30  LPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRP------------- 76

Query: 183 XXXGTRIEEEDDSRAPTPEAIASADRCFKALNFDKSCPKPGFHVPPTVE--HGMKISQSC 356
                           TP++       F  +NF  +  +P F  P   +  HG  I QSC
Sbjct: 77  ----------------TPKSPP-----FDFINFTTNPSRPPFESPHFADDKHGFLILQSC 115

Query: 357 NGLLCCTRLTEVDYGIEVPGIFTTH-AYIYNPTTRKYRILPPSPFRDVVRDDCCFEVCSI 533
           NGL  C+            G ++T   YI+NPTT  +  L   P+  V        V  +
Sbjct: 116 NGLFLCSTYN---------GNYSTRDFYIHNPTTNHHTKL---PYLQV------GAVFGL 157

Query: 534 SLAFDPIKSPDHYQVVCIWKDIVNRYDMEYMGDDYFELSYYIEIYSSKTNSWRKLISSSL 713
           +LAFDP++S D Y+V+C+      RY       D +  ++ IE+YSS T  WR +     
Sbjct: 158 NLAFDPLRSSD-YKVICV------RY------SDAYTDTFQIEMYSSVTGPWRPVQGVFS 204

Query: 714 NPFRAGFRSFTKSGVYWNGSLH 779
            P    F     SGVYWN ++H
Sbjct: 205 APLSVRF----DSGVYWNNAVH 222


Top