BLASTX nr result

ID: Papaver22_contig00025575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025575
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   174   2e-41
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   173   6e-41
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...   171   2e-40
gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precurs...   171   3e-40
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   171   3e-40

>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539891|gb|EEF41470.1| Photosystem II
           stability/assembly factor HCF136, chloroplast precursor,
           putative [Ricinus communis]
          Length = 397

 Score =  174 bits (441), Expect = 2e-41
 Identities = 85/108 (78%), Positives = 92/108 (85%)
 Frame = -3

Query: 896 WRADXXXXXXXXXXXXXLSKGTGITEDFEEVQVQSRGFGILDVGFRSKDEAWAAGGSGVL 717
           WRAD             LSKGTGI+EDFEE+ VQSRGFGILDVG+RSKDEAWAAGGSG+L
Sbjct: 290 WRADGGLWLLVRGGGLYLSKGTGISEDFEEISVQSRGFGILDVGYRSKDEAWAAGGSGIL 349

Query: 716 LRTNNGGKTWVRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLRYLG 573
           LRT NGGKTW RDKAAD+IAANLYSVKFIND++GFVLGNDGVLLRYLG
Sbjct: 350 LRTTNGGKTWTRDKAADSIAANLYSVKFINDSKGFVLGNDGVLLRYLG 397


>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago
           truncatula] gi|355508303|gb|AES89445.1| Photosystem II
           stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  173 bits (438), Expect = 6e-41
 Identities = 84/108 (77%), Positives = 92/108 (85%)
 Frame = -3

Query: 896 WRADXXXXXXXXXXXXXLSKGTGITEDFEEVQVQSRGFGILDVGFRSKDEAWAAGGSGVL 717
           WRAD             LSKGTGITE+FEE+ VQSRGFGILDVG+RS DEAWAAGGSG+L
Sbjct: 289 WRADGGLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGIL 348

Query: 716 LRTNNGGKTWVRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLRYLG 573
           LRTNNGGK+W+RDKAADNIAANLYSVKFI+D +GFVLGNDGVLLRYLG
Sbjct: 349 LRTNNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
           gi|241917298|gb|EER90442.1| hypothetical protein
           SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score =  171 bits (434), Expect = 2e-40
 Identities = 84/108 (77%), Positives = 93/108 (86%)
 Frame = -3

Query: 896 WRADXXXXXXXXXXXXXLSKGTGITEDFEEVQVQSRGFGILDVGFRSKDEAWAAGGSGVL 717
           WRAD             LSKGTGI+EDFEEVQVQSRGFGILDVG+RS++EAWAAGGSGVL
Sbjct: 290 WRADGGLWLLVRGGGLFLSKGTGISEDFEEVQVQSRGFGILDVGYRSQEEAWAAGGSGVL 349

Query: 716 LRTNNGGKTWVRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLRYLG 573
           L+T NGGK WVRDKAADNIAANLYSVKF++D++GFVLGNDGVLLRYLG
Sbjct: 350 LKTTNGGKNWVRDKAADNIAANLYSVKFLDDSKGFVLGNDGVLLRYLG 397


>gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precursor [Zea mays]
          Length = 394

 Score =  171 bits (432), Expect = 3e-40
 Identities = 83/108 (76%), Positives = 93/108 (86%)
 Frame = -3

Query: 896 WRADXXXXXXXXXXXXXLSKGTGITEDFEEVQVQSRGFGILDVGFRSKDEAWAAGGSGVL 717
           WRAD             LS+GTGITEDFEEVQVQSRGFGILDVG+RS++EAWAAGGSGVL
Sbjct: 287 WRADGGLWLLVRGGGLFLSRGTGITEDFEEVQVQSRGFGILDVGYRSQEEAWAAGGSGVL 346

Query: 716 LRTNNGGKTWVRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLRYLG 573
           L+T NGGK+W+RDKAADNIAANLYSVKF++D +GFVLGNDGVLLRYLG
Sbjct: 347 LKTTNGGKSWMRDKAADNIAANLYSVKFLDDRKGFVLGNDGVLLRYLG 394


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  171 bits (432), Expect = 3e-40
 Identities = 84/108 (77%), Positives = 91/108 (84%)
 Frame = -3

Query: 896 WRADXXXXXXXXXXXXXLSKGTGITEDFEEVQVQSRGFGILDVGFRSKDEAWAAGGSGVL 717
           WRAD             LSKGTGI+E+FEE+ VQSRGFGILDVG+RSK+EAWAAGGSGVL
Sbjct: 287 WRADGGLWLLVRGGGLYLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVL 346

Query: 716 LRTNNGGKTWVRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLRYLG 573
           LRT NGGKTW RDKAADNIAANLYSVKFI+D +GFVLGNDGVLLRYLG
Sbjct: 347 LRTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


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