BLASTX nr result

ID: Papaver22_contig00025560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025560
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884331.1| tRNA synthetase class I family protein [Arab...    80   2e-13
ref|NP_186915.1| tyrS tyrosyl-tRNA synthetase [Arabidopsis thali...    75   5e-12
ref|XP_002512791.1| tyrosyl-tRNA synthetase, putative [Ricinus c...    72   4e-11
ref|XP_004146892.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...    65   6e-09
ref|XP_004166614.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...    65   7e-09

>ref|XP_002884331.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330171|gb|EFH60590.1| tRNA synthetase
           class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 511

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
 Frame = +2

Query: 53  AKASSMATMSVIS-ASKSFLYNQNKLILFSIFKHP-KPTFSFTPKPSKNLVFFTPTT--- 217
           A   ++A+ S++   S++FL   + L + S+   P K + +F  +     +F T TT   
Sbjct: 4   ATGMTLASRSILPMCSRTFL---SPLRVASLLVFPEKLSATFFRRVQVPHLFSTSTTPLF 60

Query: 218 ---RCIHSFLQSLETKNQDMGLAQRPNIVNILEERGLLESVTSENLRLVCSSNSSNPMKA 388
              +C      SLET+NQ +    RPN+V+ILEERGLLES+TSENLR  CS     P++ 
Sbjct: 61  SSVKCSIQSTSSLETENQAVS---RPNVVDILEERGLLESITSENLRSACSDPKVAPLRV 117

Query: 389 YCGFDPTAD 415
           YCGFDPTA+
Sbjct: 118 YCGFDPTAE 126


>ref|NP_186915.1| tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana]
           gi|6957729|gb|AAF32473.1| putative tyrosyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|62320566|dbj|BAD95182.1| putative tyrosyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|117168055|gb|ABK32110.1| At3g02660 [Arabidopsis
           thaliana] gi|332640324|gb|AEE73845.1| tyrS tyrosyl-tRNA
           synthetase [Arabidopsis thaliana]
          Length = 511

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
 Frame = +2

Query: 53  AKASSMATMSVIS-ASKSFLYNQNKLILFSIFKHP-KPTFSFTPKPSKNLVFFTPTT--- 217
           A   + A+ S++   S++FL   + L + S+   P K + +F  +     +F T TT   
Sbjct: 4   ATGITFASRSILPICSRTFL---SPLRVASLLVFPEKSSATFFRRVQVPHLFSTSTTTLF 60

Query: 218 ---RCIHSFLQSLETKNQDMGLAQRPNIVNILEERGLLESVTSENLRLVCSSNSSNPMKA 388
              +C      S ET+NQ +    RPN+V+ILEERGLLES+TSENLR  CS     P++ 
Sbjct: 61  SSVKCSIHSTSSPETENQAVF---RPNVVDILEERGLLESITSENLRSACSDPKVAPLRV 117

Query: 389 YCGFDPTAD 415
           YCGFDPTA+
Sbjct: 118 YCGFDPTAE 126


>ref|XP_002512791.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
           gi|223547802|gb|EEF49294.1| tyrosyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 492

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/113 (37%), Positives = 60/113 (53%)
 Frame = +2

Query: 77  MSVISASKSFLYNQNKLILFSIFKHPKPTFSFTPKPSKNLVFFTPTTRCIHSFLQSLETK 256
           M+  +A+++ L++    +    F    P  +  P   KN +F        H       T 
Sbjct: 1   MAATAAARTLLFSTQSHLRHLSFPFSNPLSTKLPTLKKNHIFIRSLQSATHQV-----TT 55

Query: 257 NQDMGLAQRPNIVNILEERGLLESVTSENLRLVCSSNSSNPMKAYCGFDPTAD 415
            Q     +R N+V+ILEERGLLESVTS+NLR  CS ++   +K YCGFDPTA+
Sbjct: 56  TQTQESIRRQNVVDILEERGLLESVTSDNLRSACSIST---LKVYCGFDPTAE 105


>ref|XP_004146892.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 493

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/106 (38%), Positives = 57/106 (53%)
 Frame = +2

Query: 95  SKSFLYNQNKLILFSIFKHPKPTFSFTPKPSKNLVFFTPTTRCIHSFLQSLETKNQDMGL 274
           SK+FL +Q      +I   P  +F           FF PT+R   S   S  + +     
Sbjct: 16  SKAFLLSQRSFFFSTISSKPSSSF-----------FFKPTSRFFSS--SSPTSLHYSPTP 62

Query: 275 AQRPNIVNILEERGLLESVTSENLRLVCSSNSSNPMKAYCGFDPTA 412
           +   N++ ILE+RGLL+S+TS+NLR    S S +P+K YCGFDPTA
Sbjct: 63  SPPTNVIQILEQRGLLDSITSDNLR----SASLSPLKVYCGFDPTA 104


>ref|XP_004166614.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 493

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +2

Query: 95  SKSFLYNQNKLILFSIFKHPKPTFSFTPKPSKNLVFFTPTTRCIHS----FLQSLETKNQ 262
           SK+FL +Q      +I   P  +F           FF PT+R   S    FL    T + 
Sbjct: 16  SKAFLLSQRSFFFSTISSKPSSSF-----------FFKPTSRFFSSSSPTFLHYSPTPSP 64

Query: 263 DMGLAQRPNIVNILEERGLLESVTSENLRLVCSSNSSNPMKAYCGFDPTA 412
                   N++ ILE+RGLL+S+TS+NLR    S S +P+K YCGFDPTA
Sbjct: 65  PT------NVIQILEQRGLLDSITSDNLR----SASLSPLKVYCGFDPTA 104


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