BLASTX nr result

ID: Papaver22_contig00025415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025415
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    97   6e-18
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    92   1e-16
gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japo...    92   2e-16
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    92   2e-16
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    87   1e-15

>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
 Frame = +3

Query: 114  DGKLRSDKLRWMLTRNGEFSVKSLYAKLLNPLGSVSTE-TKKFWQGLWRMDTSQRIKLFT 290
            DGK   D L W  +++G FSVKS   +L N   S S E TK+ W+GL       RI++F 
Sbjct: 1011 DGK---DHLIWAPSKSGIFSVKSFSLELANMEESRSFEATKELWKGL----VPFRIEIFV 1063

Query: 291  WKCLQNTLPTREKL---GYVLDVETQCIFCKQAIESTYHLVFDCSYAKAVWE-TAPMANQ 458
            W  +   L T+EKL     + + ++ CIFC  +IEST HL  +CSY+K +W     + N 
Sbjct: 1064 WFVILGRLNTKEKLLNLKLISNEDSSCIFCSSSIESTNHLFLECSYSKELWHWWFQIWNV 1123

Query: 459  G-VSSISITNSFLDKYNEWRSGDINSISMALAATKCWFIWKERCLRIFEKQERTPAQLAI 635
              V   SI   F      ++      + M+      W IWKER  RIF+++  +  QL  
Sbjct: 1124 AWVLPSSIKELFTHWIPPFKGKFFKKVWMSCFFIILWTIWKERNSRIFQEKPNSKLQLKE 1183

Query: 636  DIARHFSYW-----------------HPLSTKNITIQQPKNTVL-----QHTWTYRTTDT 749
             I     +W                 +PL    +T  +P+  ++     QH W+  +  +
Sbjct: 1184 LILLRLGWWIKGWNEPFPYSAEDIVRNPLCLNWLTPVKPQKAIMPAPFPQH-WSPPSIGS 1242

Query: 750  NKLNCDASWVSKNANSGFGCVLRN 821
             K N DAS  S    S  G VLR+
Sbjct: 1243 LKWNVDASIKSSLQKSSIGGVLRD 1266


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 15/247 (6%)
 Frame = +3

Query: 126  RSDKLRWMLTRNGEFSVKSLYAKLLNP-LGS-------VSTETKKFWQGLWRMDTSQRIK 281
            R D + W  TR+G FSV+S Y    N   GS        S+ ++  W  LW+++   +IK
Sbjct: 814  REDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDGASSSSRPVWDNLWKLEIPPKIK 873

Query: 282  LFTWKCLQNTLPTREKLG-YVLDVETQCIFCKQAIESTYHLVFDCSYAKAVWETAPMAN- 455
            +F W+ L   +P +  L    + V+  C  C   +E   H+VF C  AK +W+   + + 
Sbjct: 874  IFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSR 933

Query: 456  -QGVSSISITNSFLDKYNEWRSGDI---NSISMA-LAATKCWFIWKERCLRIFEKQERTP 620
             Q +     + S L +    + G +   N+I M  L  T  W+IW ER   +  ++ + P
Sbjct: 934  IQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGMTELILTGAWYIWWERRQLVQGERIQNP 993

Query: 621  AQLAIDIARHFSYWHPLSTKNITIQQPKNTVLQHTWTYRTTDTNKLNCDASWVSKNANSG 800
            A+ A+ IA        L+T  +   +   T +Q+ W         +N DA++   + + G
Sbjct: 994  ARSAMSIA-------TLTTNYMLSNKKGKTKIQNGWKKPPEGMLMINVDAAFDFDSGSGG 1046

Query: 801  FGCVLRN 821
             G VLR+
Sbjct: 1047 IGVVLRD 1053


>gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japonica Group]
          Length = 446

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 17/252 (6%)
 Frame = +3

Query: 117 GKLRSDKLRWMLTRNGEFSVKSLYAKLLNPL--------GSVSTETKKFWQGLWRMDTSQ 272
           G  R D + W  TR+G FSV+S Y    N           S S+ ++  W  +W++++  
Sbjct: 200 GARREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDSASSSSRPVWDNMWKLESPP 259

Query: 273 RIKLFTWKCLQNTLPTREKLG-YVLDVETQCIFCKQAIESTYHLVFDCSYAKAVWE---- 437
           +IK+F W+ L   +P +  L    + V+  C  C   +E   H+VF C  AK +W+    
Sbjct: 260 KIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCPSGVEDIKHMVFTCKRAKLIWKQLGI 319

Query: 438 ---TAPMANQGVSSISITNSFLDKYNEWRSGDINSISMA-LAATKCWFIWKERCLRIFEK 605
                P+     S   +    + K    +   +N+I MA L  T  W+IW ER   +  +
Sbjct: 320 WSRIQPILGFDWSGYVLVEEVIRKGG--KVSHLNAIGMAELILTGAWYIWWERRQLVHGE 377

Query: 606 QERTPAQLAIDIARHFSYWHPLSTKNITIQQPKNTVLQHTWTYRTTDTNKLNCDASWVSK 785
           + + PA+ A+ IA        L+T  +   +   T +Q+ W         +N DA++   
Sbjct: 378 RIQNPARSAMSIA-------TLTTNYMLSNKKGKTKIQNGWKKPPEGMLMINVDAAFDID 430

Query: 786 NANSGFGCVLRN 821
           + +   G VLR+
Sbjct: 431 SGSGDTGVVLRD 442


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 68/253 (26%), Positives = 103/253 (40%), Gaps = 16/253 (6%)
 Frame = +3

Query: 117  GKLRSDKLRWMLTRNGEFSVKSLYAKLL-------NPLGSVSTETKKFWQGLWRMDTSQR 275
            GK   D+  W  +R+G +SVKS Y  +        NP   +       +Q +W++D   +
Sbjct: 1003 GKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPK 1062

Query: 276  IKLFTWKCLQNTLPTREKLGY-VLDVETQCIFCKQAIESTYHLVFDCSYAKAVWETAPMA 452
            I  F W+C+ N L     L Y  L  E  C+ C    E+  HL+F C +A+  W  +P+ 
Sbjct: 1063 IHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLP 1122

Query: 453  NQ--GVSSISITNSFLDKYNEWRSGDINSISMALAATKCWFIWKERCLRIFEKQERTPAQ 626
                G  + S+  +     +  +S    S   AL     W +WK R   +F+ +E T  Q
Sbjct: 1123 APPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQ 1182

Query: 627  LAIDIARHFSYWH------PLSTKNITIQQPKNTVLQHTWTYRTTDTNKLNCDASWVSKN 788
            + +        W+      P  T +   +  K     H W        K N D +W    
Sbjct: 1183 VILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWV-------KCNTDGAWSKDL 1235

Query: 789  ANSGFGCVLRNCT 827
             N G G VLRN T
Sbjct: 1236 GNCGVGWVLRNHT 1248


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 87.4 bits (215), Expect(2) = 1e-15
 Identities = 67/251 (26%), Positives = 105/251 (41%), Gaps = 16/251 (6%)
 Frame = +3

Query: 117 GKLRSDKLRWMLTRNGEFSVKSLYAKLLNPLGSVSTETK-------KFWQGLWRMDTSQR 275
           G+   D   W  T +G+++VKS Y  L   +   S+  +         +Q +W+  TS +
Sbjct: 206 GRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPK 265

Query: 276 IKLFTWKCLQNTLPTREKLGY-VLDVETQCIFCKQAIESTYHLVFDCSYAKAVWETA--- 443
           I+ F WKCL N+LP    L Y  L  E+ CI C    E+  HL+F C++A+  W  +   
Sbjct: 266 IQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIP 325

Query: 444 -PMANQGVSSISITNSFLDKYNEWRSGDIN---SISMALAATKCWFIWKERCLRIFEKQE 611
            P+  +   SI     +++ Y  +  G+ N     +  L     W +WK R   +F  +E
Sbjct: 326 IPLGGEWADSI-----YVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGRE 380

Query: 612 RTPAQLAIDIARHFSYWHPLSTKNITIQQPK-NTVLQHTWTYRTTDTNKLNCDASWVSKN 788
               ++          W   +       +P+ N      W        K N DA+W   N
Sbjct: 381 FNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDN 440

Query: 789 ANSGFGCVLRN 821
              G G VLRN
Sbjct: 441 ERCGIGWVLRN 451



 Score = 22.3 bits (46), Expect(2) = 1e-15
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 2   SDLIDQDTKKWNEPLLHSFF 61
           SDLID+  ++W + ++   F
Sbjct: 172 SDLIDESGREWRKDVIEMLF 191


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