BLASTX nr result

ID: Papaver22_contig00025215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025215
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...    55   8e-06

>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
 Frame = -2

Query: 398  DMHSSVFEEMRNQDQASLASTLIRHTAKRLLDDKKARTKGVLQSRRKFAPEEKCETEKVK 219
            D +S  F+      +AS  S   RH ++ +   K  R + V +   +         EK++
Sbjct: 610  DSNSLKFQGSIYLKEASFRSKDSRHISEVVQSIKTLRRQVVARESERAERATLVTQEKLQ 669

Query: 218  MDK---KPIKLTSVTIFPEVGGQGGDAMVGTLEVHVDGCTYTTSGSHFHTQFMFKKVKVA 48
            +     KPI+L+ + I P  GG+G   + GTLE HV+G  Y+T+        MF  +K A
Sbjct: 670  LANNRFKPIRLSDLWIRPAFGGRGRK-IPGTLEAHVNGFRYSTTRQDERVDIMFPNIKHA 728

Query: 47   FYRVEDEEKMLPLLH 3
            F++  + E M+ LLH
Sbjct: 729  FFQPAENE-MITLLH 742


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