BLASTX nr result

ID: Papaver22_contig00024993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024993
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    69   4e-10
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    68   7e-10
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003615617.1| F-box/kelch-repeat protein [Medicago truncat...    67   2e-09

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
 Frame = +2

Query: 2   SLISSSDFVRSHLQLNKNNSSSNH---MLIVDRNDNLFPISYDLLESSLSMKEIARKSVY 172
           SLIS  +FV++HL+  K ++++NH    L  D + ++ P +Y   + +L   ++     Y
Sbjct: 37  SLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSY 96

Query: 173 ILLPFRPERSRVEVLGSCNGLVF-LWHFNCYGLEFLCVWNPATRDYKMIRPSPNSALQSC 349
                 PE S +E+LGSCNGLV  L H N      + +WNP+TR+ + +   P S+    
Sbjct: 97  ------PEYSYIEILGSCNGLVCGLIHDN----PLIYIWNPSTRESREL-AIPGSSEDD- 144

Query: 350 VGIQGLRYDCKNDDYKFLIGSWSDS------------VDVFSLRSNSW 457
               G  YD K DDYK +  S S S            V+VF+L+SN W
Sbjct: 145 -AFYGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTLKSNIW 191


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
 Frame = +2

Query: 2   SLISSSDFVRSHLQLNKNNSSSNHMLIVDRNDNLFPISYDLLESSLSMKEIARKSVYILL 181
           +LI S  F+  +L LN +  S  ++ I+ ++  L+ +S+DLL++   +            
Sbjct: 33  TLIDSPTFI--YLHLNHSIESPCNLSIILKSSELYSLSFDLLDNIQPLDH---------- 80

Query: 182 PFRPERSRVEVLGSCNGLVFLWHFNCYGLEFLCVWNPATRDYKMIRPSPNS-----ALQS 346
           P       V++LGSCNGL+ +    C  ++ + +WNP+ R ++++   P        + S
Sbjct: 81  PLMCYNHGVKILGSCNGLLCI----CNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCS 136

Query: 347 C-VGIQGLRYDCKNDDYKFLI---------GSWSDSVDVFSLRSNSWEK 463
           C V + G  YD  NDDYK +           S+   V VFSLR NSW +
Sbjct: 137 CRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRR 185


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
 Frame = +2

Query: 2   SLISSSDFVRSHLQLNKNNSSSNHMLIVDRNDNLFPISYDLLESSLSMKEIARKSVYILL 181
           +LI + DF+++HL  +        ++++    N     Y    +   +  I  KS     
Sbjct: 33  TLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGVAEFYAADHNGGLIDPIKLKS----- 87

Query: 182 PFRPERSRVEVLGSCNGLVFLWHFNCYGLEFLCVWNPATRDYKMI-RPSPNSALQSCVGI 358
           P + + +   ++GSCN LV L        + L +WNP T  YK++  P    A  +   +
Sbjct: 88  PIKSKSNGTRIVGSCNSLVLLMQ----NTDKLLLWNPFTTQYKILPEPQREKATFTSQYL 143

Query: 359 Q----GLRYDCKNDDYKFL----IGSWSDSVDVFSLRSNSWEKFK----TSYRFPHDELI 502
           Q    GL YD  +DDYK +      S  D V ++SLRSNSW +       +Y F    + 
Sbjct: 144 QYDVFGLGYDAASDDYKVVRIQKCRSKKDGVGIYSLRSNSWTRLHDFPCDNYEFDWTAMG 203

Query: 503 KQKSGVL 523
           K  SG L
Sbjct: 204 KHVSGTL 210


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
 Frame = +2

Query: 2   SLISSSDFVRSHLQLNK--NNSSSNHMLIVDRNDNLFPISYDLLESSLSMKEIARKSVYI 175
           SLIS   FV+SHL+  +  N++ S  +L+  R     P S D   +S   ++ A + +  
Sbjct: 33  SLISDPKFVKSHLKTAREVNSNKSQRLLLSTRT----PQSVDFEAASEGDEDNAVQELEY 88

Query: 176 LLPFRPERSR-VEVLGSCNGLVFLWHFNCYGLEFLCVWNPATRDYK-MIRPSPNSALQSC 349
               R   +  + ++GSC+GL+ L+         L +WNP+TRDYK M +PS +      
Sbjct: 89  PDVVRCSPTYFIGIMGSCDGLICLF----VDYAKLVLWNPSTRDYKEMPKPSCDHGFDFF 144

Query: 350 VGIQGLRYDCKNDDYKFLI-------GSWSDSVDVFSLRSNSWEK 463
            GI    YD  NDDYKF+I       GS    V+V +L++N W K
Sbjct: 145 AGIG---YDSSNDDYKFVIPSCTTADGSEQIMVEVLTLKTNVWRK 186


>ref|XP_003615617.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516952|gb|AES98575.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
 Frame = +2

Query: 2   SLISSSDFVRSHLQLNKNNSSSNHMLIVDRNDNLFPISYDLLESSLSMKEIARKSVYILL 181
           SLIS SDF  SH QL     +   +LI     NL  +S DL  S          ++  LL
Sbjct: 37  SLISQSDFANSHFQLTAKTHAPRILLITP---NLESLSIDLETSLYDDSASYSLNINFLL 93

Query: 182 PFRPERSRVEVLGSCNGLVFLWHFNCYGLEFLCVWNPATRDYKMIRPSPNSALQ---SCV 352
           P     +++++ GSC G + L   +C     LC+WNP+T  +K I   PNS +       
Sbjct: 94  P--QSFTQLDIKGSCRGFILLSCGSC-----LCLWNPSTGVHKYI---PNSLIDCNLDAY 143

Query: 353 GIQGLRYDCKNDDYKFLIGSWSDS-------VDVFSLRSNSWEKFKTSYRFPH 490
            + G  YD   DDY  L  S+  +       + +FSLR+++W + +    F +
Sbjct: 144 HLYGFGYDESRDDYFVLSMSYDPNAYDKLTRLGLFSLRADAWNEIEGDNYFSY 196


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