BLASTX nr result

ID: Papaver22_contig00024970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024970
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN30962.1| unknown [Zea mays]                                      65   3e-12
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l...    75   4e-12
ref|XP_002866661.1| polyadenylate-binding protein family protein...    75   4e-12
emb|CBI33270.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi...    75   4e-12

>gb|ACN30962.1| unknown [Zea mays]
          Length = 100

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = +3

Query: 261 FIQQKSLLNGFYFKEFHISKTLWLTKFVSQDCDSVYCPTCLKMLLHF 401
           FIQ KS LN F F++F+ISKT WL+K VSQDCD V   T L+MLLHF
Sbjct: 33  FIQVKSFLNTFLFQKFNISKTFWLSKLVSQDCDPVDSSTSLEMLLHF 79



 Score = 31.2 bits (69), Expect(2) = 3e-12
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 127 LLHPRNIGSLSRNFKLTTMQF 189
           LLHPRNI  L R+  L TMQF
Sbjct: 11  LLHPRNISPLWRDLNLATMQF 31


>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
           vinifera]
          Length = 130

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/62 (62%), Positives = 40/62 (64%)
 Frame = -1

Query: 189 ELHGRQLKVSAKRTNVPGMKQFRGRRFNPYMXXXXXXXXXXXXXXXXXXXGKVPRFRRPM 10
           ELHGRQLKV AKRTNVPGMKQFR RRFNPYM                   GK PRFRRPM
Sbjct: 65  ELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPM 124

Query: 9   RF 4
           R+
Sbjct: 125 RY 126



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -2

Query: 401 EVQQHFQACGTVNRVTILTDKFGQPKGFAY 312
           EVQQHFQ+CGTVNRVTILTDK+GQPKGFAY
Sbjct: 17  EVQQHFQSCGTVNRVTILTDKYGQPKGFAY 46


>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312496|gb|EFH42920.1|
           polyadenylate-binding protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/62 (61%), Positives = 40/62 (64%)
 Frame = -1

Query: 189 ELHGRQLKVSAKRTNVPGMKQFRGRRFNPYMXXXXXXXXXXXXXXXXXXXGKVPRFRRPM 10
           ELHGRQLKV  KRTNVPG+KQFRGRRFNPYM                   GK PRFRRPM
Sbjct: 155 ELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSPYGYGKAPRFRRPM 214

Query: 9   RF 4
           R+
Sbjct: 215 RY 216



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -2

Query: 401 EVQQHFQACGTVNRVTILTDKFGQPKGFAY 312
           EVQQHFQ CGTV+RVTILTDKFGQPKGFAY
Sbjct: 107 EVQQHFQTCGTVHRVTILTDKFGQPKGFAY 136


>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/62 (62%), Positives = 40/62 (64%)
 Frame = -1

Query: 189 ELHGRQLKVSAKRTNVPGMKQFRGRRFNPYMXXXXXXXXXXXXXXXXXXXGKVPRFRRPM 10
           ELHGRQLKV AKRTNVPGMKQFR RRFNPYM                   GK PRFRRPM
Sbjct: 80  ELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPM 139

Query: 9   RF 4
           R+
Sbjct: 140 RY 141



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -2

Query: 401 EVQQHFQACGTVNRVTILTDKFGQPKGFAY 312
           EVQQHFQ+CGTVNRVTILTDK+GQPKGFAY
Sbjct: 32  EVQQHFQSCGTVNRVTILTDKYGQPKGFAY 61


>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
           protein II-like [Arabidopsis thaliana]
           gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|23197620|gb|AAN15337.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|332010647|gb|AED98030.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 220

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/62 (61%), Positives = 40/62 (64%)
 Frame = -1

Query: 189 ELHGRQLKVSAKRTNVPGMKQFRGRRFNPYMXXXXXXXXXXXXXXXXXXXGKVPRFRRPM 10
           ELHGRQLKV  KRTNVPG+KQFRGRRFNPYM                   GK PRFRRPM
Sbjct: 155 ELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPM 214

Query: 9   RF 4
           R+
Sbjct: 215 RY 216



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -2

Query: 401 EVQQHFQACGTVNRVTILTDKFGQPKGFAY 312
           EVQQHFQ CGTV+RVTILTDKFGQPKGFAY
Sbjct: 107 EVQQHFQTCGTVHRVTILTDKFGQPKGFAY 136


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