BLASTX nr result

ID: Papaver22_contig00024762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024762
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16210.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Ar...   172   3e-41
ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabi...   172   3e-41
ref|XP_002889659.1| hypothetical protein ARALYDRAFT_887985 [Arab...   171   7e-41
ref|XP_003543494.1| PREDICTED: probable NOT transcription comple...   166   1e-39

>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 3/128 (2%)
 Frame = -1

Query: 377 DTTGRPXXXXXXXXXXXATPVYHHAGTVQGLHNMHGSFNIP---GSLTSRNSTMNGVPSG 207
           D+ GR            A+PV+HH+G++QGLHN+HGSFN+P   G+L SRNST+N VPSG
Sbjct: 18  DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77

Query: 206 AVQQPTGSLSNGRFASNNIPIALSQMSHGSSQAHSGVGNRGGMGVSPILGNAGSRMTSSM 27
            VQQPTG+LS+GR+ASN++P+ALSQ+SHGSS  HSGV NRGG+GVSPILGNAG R+TSSM
Sbjct: 78  GVQQPTGNLSSGRYASNSLPVALSQISHGSSHGHSGVANRGGLGVSPILGNAGPRITSSM 137

Query: 26  GNIFGGNN 3
           GNI GG N
Sbjct: 138 GNIVGGGN 145


>ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
           gi|332190046|gb|AEE28167.1| CCR4-NOT transcription
           complex subunit 2 [Arabidopsis thaliana]
          Length = 614

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/126 (66%), Positives = 100/126 (79%), Gaps = 3/126 (2%)
 Frame = -1

Query: 377 DTTGRPXXXXXXXXXXXATPVYHHAGTVQGLHNMHGSFNIP---GSLTSRNSTMNGVPSG 207
           D +GR            A+PV+HHAG++QGLHN+HG+FN+P   GSL SRNS++NGVPS 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 206 AVQQPTGSLSNGRFASNNIPIALSQMSHGSSQAHSGVGNRGGMGVSPILGNAGSRMTSSM 27
            VQQ  GS+SNGRFAS+NIP+ALSQMSHGSS  HSG+ NRGG+GVSPILGN GSRMTSSM
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137

Query: 26  GNIFGG 9
           GN+ GG
Sbjct: 138 GNMVGG 143


>ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
           gi|110738383|dbj|BAF01118.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190045|gb|AEE28166.1|
           CCR4-NOT transcription complex subunit 2 [Arabidopsis
           thaliana]
          Length = 546

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/126 (66%), Positives = 100/126 (79%), Gaps = 3/126 (2%)
 Frame = -1

Query: 377 DTTGRPXXXXXXXXXXXATPVYHHAGTVQGLHNMHGSFNIP---GSLTSRNSTMNGVPSG 207
           D +GR            A+PV+HHAG++QGLHN+HG+FN+P   GSL SRNS++NGVPS 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 206 AVQQPTGSLSNGRFASNNIPIALSQMSHGSSQAHSGVGNRGGMGVSPILGNAGSRMTSSM 27
            VQQ  GS+SNGRFAS+NIP+ALSQMSHGSS  HSG+ NRGG+GVSPILGN GSRMTSSM
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137

Query: 26  GNIFGG 9
           GN+ GG
Sbjct: 138 GNMVGG 143


>ref|XP_002889659.1| hypothetical protein ARALYDRAFT_887985 [Arabidopsis lyrata subsp.
           lyrata] gi|297335501|gb|EFH65918.1| hypothetical protein
           ARALYDRAFT_887985 [Arabidopsis lyrata subsp. lyrata]
          Length = 615

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/126 (65%), Positives = 100/126 (79%), Gaps = 3/126 (2%)
 Frame = -1

Query: 377 DTTGRPXXXXXXXXXXXATPVYHHAGTVQGLHNMHGSFNIP---GSLTSRNSTMNGVPSG 207
           D +GR            A+P +HHAG++QGLHN+HG+FN+P   GSL SRNS++NGVPS 
Sbjct: 18  DGSGRTFTSSFSGQSGAASPAFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 206 AVQQPTGSLSNGRFASNNIPIALSQMSHGSSQAHSGVGNRGGMGVSPILGNAGSRMTSSM 27
            VQQ  GS+SNGRFAS+NIP+ALSQ+SHGSS  HSG+ NRGG+GVSPILGNAGSRMTSSM
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQISHGSSHGHSGLTNRGGLGVSPILGNAGSRMTSSM 137

Query: 26  GNIFGG 9
           GN+ GG
Sbjct: 138 GNMVGG 143


>ref|XP_003543494.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Glycine max]
          Length = 628

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/130 (63%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
 Frame = -1

Query: 380 PDTTGRPXXXXXXXXXXXATPVYHHAGTVQGLHNMHGSFNIPG---SLTSRNSTMNGVPS 210
           PD  GR            A+PV+HH+G++QGLHN+HGSFN+P    +LTSRNST+N V +
Sbjct: 17  PDGAGRSFATSFSGQSGVASPVFHHSGSIQGLHNIHGSFNVPNMPSTLTSRNSTINSVRT 76

Query: 209 GA-VQQPTGSLSNGRFASNNIPIALSQMSHGSSQAHSGVGNRGGMGVSPILGNAGSRMTS 33
           G  VQQP+ SLS+GRFASNN+P+ALSQ+SHG S  HSGV NRGG+GVSPILGNAG R+TS
Sbjct: 77  GGGVQQPSASLSSGRFASNNLPVALSQLSHGGSHGHSGVNNRGGLGVSPILGNAGPRITS 136

Query: 32  SMGNIFGGNN 3
           SMGN+ GG N
Sbjct: 137 SMGNMVGGGN 146


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