BLASTX nr result
ID: Papaver22_contig00024722
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00024722 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 84 1e-14 dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila] 84 2e-14 ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 83 2e-14 ref|NP_568218.1| Transcription elongation factor (TFIIS) family ... 82 4e-14 dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 82 4e-14 >ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis] gi|223530431|gb|EEF32318.1| conserved hypothetical protein [Ricinus communis] Length = 362 Score = 84.0 bits (206), Expect = 1e-14 Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 6/74 (8%) Frame = +3 Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLSCRNCD- 347 MD+D+FR IL SGVDVW FIDTAI VASLD+ +ELK+RRD IVE LY S CRNCD Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSSG-RCRNCDL 59 Query: 348 -----NNDNEVLHR 374 NN +E+ R Sbjct: 60 DVGRINNGHEIKER 73 >dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila] Length = 348 Score = 83.6 bits (205), Expect = 2e-14 Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 1/76 (1%) Frame = +3 Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347 MDLD+FR I+ +GVDVW FIDTAI VASLDY ELK RRD IVE+LY S + CRNCD Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60 Query: 348 NNDNEVLHRHSSPRVS 395 ++ + RV+ Sbjct: 61 FGSGGIVTEAAVARVN 76 >ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] Length = 345 Score = 83.2 bits (204), Expect = 2e-14 Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 2/66 (3%) Frame = +3 Query: 168 KMDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSN--LSCRN 341 ++DLD+FR IL +GVDVW FIDTA+ VASLDY ++LK RRDGIVE+LY ++ CRN Sbjct: 3 RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62 Query: 342 CDNNDN 359 CD + N Sbjct: 63 CDTDRN 68 >ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription subunit 26c gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] Length = 353 Score = 82.4 bits (202), Expect = 4e-14 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = +3 Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347 MDLD+FR ++ +GVDVW FIDTAI VASLDY ELK RRD IVE+LY S + CRNCD Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60 Query: 348 NNDNEVLHRHSSPRVSN 398 + + RV+N Sbjct: 61 FGGGGNVTEAAIGRVNN 77 >dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] Length = 361 Score = 82.4 bits (202), Expect = 4e-14 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = +3 Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347 MDLD+FR ++ +GVDVW FIDTAI VASLDY ELK RRD IVE+LY S + CRNCD Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60 Query: 348 NNDNEVLHRHSSPRVSN 398 + + RV+N Sbjct: 61 FGGGGNVTEAAIGRVNN 77