BLASTX nr result

ID: Papaver22_contig00024722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024722
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]      84   2e-14
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...    83   2e-14
ref|NP_568218.1| Transcription elongation factor (TFIIS) family ...    82   4e-14
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]         82   4e-14

>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 6/74 (8%)
 Frame = +3

Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLSCRNCD- 347
           MD+D+FR IL  SGVDVW FIDTAI VASLD+ +ELK+RRD IVE LY  S   CRNCD 
Sbjct: 1   MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSSG-RCRNCDL 59

Query: 348 -----NNDNEVLHR 374
                NN +E+  R
Sbjct: 60  DVGRINNGHEIKER 73


>dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
          Length = 348

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347
           MDLD+FR I+  +GVDVW FIDTAI VASLDY  ELK RRD IVE+LY  S  + CRNCD
Sbjct: 1   MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60

Query: 348 NNDNEVLHRHSSPRVS 395
                ++   +  RV+
Sbjct: 61  FGSGGIVTEAAVARVN 76


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
 Frame = +3

Query: 168 KMDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSN--LSCRN 341
           ++DLD+FR IL  +GVDVW FIDTA+ VASLDY ++LK RRDGIVE+LY  ++    CRN
Sbjct: 3   RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62

Query: 342 CDNNDN 359
           CD + N
Sbjct: 63  CDTDRN 68


>ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
           thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
           Full=Probable mediator of RNA polymerase II
           transcription subunit 26c gi|332004072|gb|AED91455.1|
           Transcription elongation factor (TFIIS) family protein
           [Arabidopsis thaliana]
          Length = 353

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +3

Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347
           MDLD+FR ++  +GVDVW FIDTAI VASLDY  ELK RRD IVE+LY  S  + CRNCD
Sbjct: 1   MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60

Query: 348 NNDNEVLHRHSSPRVSN 398
                 +   +  RV+N
Sbjct: 61  FGGGGNVTEAAIGRVNN 77


>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
          Length = 361

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +3

Query: 171 MDLDEFRMILRKSGVDVWNFIDTAISVASLDYRDELKERRDGIVEKLYLPSNLS-CRNCD 347
           MDLD+FR ++  +GVDVW FIDTAI VASLDY  ELK RRD IVE+LY  S  + CRNCD
Sbjct: 1   MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60

Query: 348 NNDNEVLHRHSSPRVSN 398
                 +   +  RV+N
Sbjct: 61  FGGGGNVTEAAIGRVNN 77


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