BLASTX nr result

ID: Papaver22_contig00024588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024588
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus...    84   2e-14
gb|AEI71779.1| JOKA2 [Nicotiana tabacum]                               52   2e-13
ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Viti...    80   4e-13
ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|1...    79   9e-13
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...    78   1e-12

>ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus communis]
           gi|223544790|gb|EEF46305.1| 60S ribosomal protein L28,
           putative [Ricinus communis]
          Length = 144

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = +2

Query: 47  GLANAKTVSVQAGKDSGIVLATTKTNRQKNPSALVHKTVMKKEFSRMAKAVANQI 211
           GL+N KTVS+QAGKD  ++LATTKT +Q  PSAL+HK+VMKKEF RMAKAV NQ+
Sbjct: 50  GLSNKKTVSIQAGKDQSVILATTKTKKQNRPSALLHKSVMKKEFRRMAKAVQNQV 104


>gb|AEI71779.1| JOKA2 [Nicotiana tabacum]
          Length = 843

 Score = 52.0 bits (123), Expect(2) = 2e-13
 Identities = 19/35 (54%), Positives = 29/35 (82%)
 Frame = +2

Query: 386 ESNYNICSICFSELGSDAEYTRIDKPIFYRCPRRF 490
           + NY++CSICF+E+G+DA+Y R+D+P+ YR P  F
Sbjct: 447 QENYDLCSICFAEMGNDADYIRMDRPLTYRHPLSF 481



 Score = 48.9 bits (115), Expect(2) = 2e-13
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 288 SHFDSTDCVFHKGVQCDGCWVHHITEPRFKSNVR 389
           +H D T  +FH+GV+CDGC VH IT PRF S V+
Sbjct: 414 NHSDGTGTIFHRGVRCDGCGVHPITGPRFISKVQ 447


>ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
           gi|147863559|emb|CAN84039.1| hypothetical protein
           VITISV_024169 [Vitis vinifera]
           gi|297743118|emb|CBI35985.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = +2

Query: 47  GLANAKTVSVQAGKDSGIVLATTKTNRQKNPSALVHKTVMKKEFSRMAKAVANQI 211
           GLAN KTV++Q GKD+ +VLATTKT +Q  P +L+HK+ MKKEF RMAKAV+NQ+
Sbjct: 50  GLANHKTVTIQGGKDNAVVLATTKTKKQNKPGSLLHKSAMKKEFRRMAKAVSNQV 104


>ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|118482187|gb|ABK93022.1|
           unknown [Populus trichocarpa]
           gi|222845515|gb|EEE83062.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +2

Query: 47  GLANAKTVSVQ-AGKDSGIVLATTKTNRQKNPSALVHKTVMKKEFSRMAKAVANQII*QN 223
           GLAN KTV++Q A KD  +VLATTKT +Q  P+AL+HK+VMKKEFSRMAKAV NQ+   N
Sbjct: 50  GLANKKTVTIQPADKDQAVVLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVADNN 109


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/56 (69%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +2

Query: 47  GLANAKTVSVQ-AGKDSGIVLATTKTNRQKNPSALVHKTVMKKEFSRMAKAVANQI 211
           GLAN KTV+VQ AGKD  ++LATTKT +Q  P+AL+HK+VMKKEF RMAKAV NQ+
Sbjct: 50  GLANQKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQV 105


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