BLASTX nr result

ID: Papaver22_contig00024561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024561
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34365.3| unnamed protein product [Vitis vinifera]              155   2e-35
ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   148   2e-33
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   144   6e-32
emb|CBI16010.3| unnamed protein product [Vitis vinifera]              141   3e-31

>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  155 bits (392), Expect = 2e-35
 Identities = 81/138 (58%), Positives = 95/138 (68%)
 Frame = +3

Query: 126 MSHAREGRSISRSLTPPPSRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGEVVNPGNN 305
           M ++REGRS+S + +  P R                             +  + VNPGNN
Sbjct: 1   MPYSREGRSVSPANSGSPIR-----GRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNN 55

Query: 306 LYVTGLSTRVSTSDLEKHFSAEGKIAECHLVTDPRTKESRGFAFIMMETVEDADRCIKYL 485
           LYVTGLSTRV+ SDLEK+F++EGK+ ECHLVTDPRT+ESRGF F+ METVEDADRCIKYL
Sbjct: 56  LYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYL 115

Query: 486 NRSVLEGRLITVEKVWCV 539
           NRSVLEGRLITVEKVW V
Sbjct: 116 NRSVLEGRLITVEKVWSV 133


>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  149 bits (377), Expect = 1e-33
 Identities = 77/134 (57%), Positives = 94/134 (70%)
 Frame = +3

Query: 126 MSHAREGRSISRSLTPPPSRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGEVVNPGNN 305
           M+++REGRS+S   +  P R                             + G+  NPGNN
Sbjct: 1   MAYSREGRSVSPRNSGSPGR-----------GRRSRSLSRSRRSRSRSNDSGDASNPGNN 49

Query: 306 LYVTGLSTRVSTSDLEKHFSAEGKIAECHLVTDPRTKESRGFAFIMMETVEDADRCIKYL 485
           LYVTGLSTRV++SDLEK+FS+EGK+ ECHLVTDPRT+ESRGFAF+ METVEDA+RC+KYL
Sbjct: 50  LYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANRCVKYL 109

Query: 486 NRSVLEGRLITVEK 527
           NRSVLEGR+ITVEK
Sbjct: 110 NRSVLEGRVITVEK 123


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  148 bits (374), Expect = 2e-33
 Identities = 78/134 (58%), Positives = 92/134 (68%)
 Frame = +3

Query: 126 MSHAREGRSISRSLTPPPSRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGEVVNPGNN 305
           M ++REGRS+S + +  P R                             +  + VNPGNN
Sbjct: 1   MPYSREGRSVSPANSGSPIR-----GRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNN 55

Query: 306 LYVTGLSTRVSTSDLEKHFSAEGKIAECHLVTDPRTKESRGFAFIMMETVEDADRCIKYL 485
           LYVTGLSTRV+ SDLEK+F++EGK+ ECHLVTDPRT+ESRGF F+ METVEDADRCIKYL
Sbjct: 56  LYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYL 115

Query: 486 NRSVLEGRLITVEK 527
           NRSVLEGRLITVEK
Sbjct: 116 NRSVLEGRLITVEK 129


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  144 bits (362), Expect = 6e-32
 Identities = 66/82 (80%), Positives = 75/82 (91%)
 Frame = +3

Query: 282 EVVNPGNNLYVTGLSTRVSTSDLEKHFSAEGKIAECHLVTDPRTKESRGFAFIMMETVED 461
           +  NPGNNLYVTGLSTRV+T DLEK+F  EGK+ ECHLVTDPRT+ESRGFAF+ MET+ED
Sbjct: 41  DAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLED 100

Query: 462 ADRCIKYLNRSVLEGRLITVEK 527
           A+RC+KYLNRSVLEGRLITVEK
Sbjct: 101 AERCVKYLNRSVLEGRLITVEK 122


>emb|CBI16010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  141 bits (356), Expect = 3e-31
 Identities = 81/145 (55%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
 Frame = +3

Query: 132 HAREGRSISRSLTPPPSRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGEVVNPGNNLY 311
           + R GRS+SRSL+ P SR                             E  EV NPGNNLY
Sbjct: 16  YRRYGRSMSRSLSSPRSR-----------------------SRSRSRESSEVENPGNNLY 52

Query: 312 VTGLSTRVSTSDLEKHFSAEGKIAECHLVTDPRTKESRGFAFIMMETVEDADRCIKYLNR 491
           VTGLSTRV+  +LEKHF++EG +A+ HLVTDP T+ESRGF F+ M TVE+A+RCIKYL+R
Sbjct: 53  VTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEANRCIKYLDR 112

Query: 492 SVLEGRLITVEKVWCVCSFS--DFK 560
           SVLEGR+ITVEKV  VCS S  DFK
Sbjct: 113 SVLEGRVITVEKV-AVCSSSSPDFK 136


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