BLASTX nr result

ID: Papaver22_contig00024534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024534
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|2...    99   9e-19
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...    93   4e-17
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag...    89   5e-16
ref|XP_003601344.1| Double-stranded RNA binding protein [Medicag...    83   5e-14

>ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|222850042|gb|EEE87589.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = +3

Query: 165 MYKSRLQELCHHKLWGLPNYASTRDGPDHNPKFKASVLINGVSFDTPDFCKSSKEAQNEA 344
           M K++LQE+CH + WGLP Y++ +DGPDH P FKASV +NG+SF +   CKSSK+A N+A
Sbjct: 1   MDKTKLQEVCHKRQWGLPKYSAMKDGPDHTPCFKASVYVNGISFHSSASCKSSKDAHNDA 60

Query: 345 AKLAYHHFASSDP 383
           AK+A+ HF S  P
Sbjct: 61  AKMAFLHFTSPPP 73


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = +3

Query: 165 MYKSRLQELCHHKLWGLPNYASTRDGPDHNPKFKASVLINGVSFDTPDFCKSSKEAQNEA 344
           MYK++LQELCH K W LP Y++T+ G DHNP F A+V++NG SF +    KSSK AQN A
Sbjct: 1   MYKTKLQELCHQKTWSLPEYSTTKVGQDHNPIFHATVIVNGYSFSSSSPSKSSKLAQNNA 60

Query: 345 AKLAYHHFAS 374
           AKLA+ HF+S
Sbjct: 61  AKLAFDHFSS 70


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 42/77 (54%), Positives = 54/77 (70%)
 Frame = +3

Query: 165 MYKSRLQELCHHKLWGLPNYASTRDGPDHNPKFKASVLINGVSFDTPDFCKSSKEAQNEA 344
           MYKS+LQELC  + W LP Y S+R G  HNP+F A+V +N +SF +P    +SK+AQN+A
Sbjct: 1   MYKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDA 60

Query: 345 AKLAYHHFASSDPLYRP 395
           AKLAY HF+ S P   P
Sbjct: 61  AKLAYEHFSISRPSPSP 77


>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|357462121|ref|XP_003601342.1| Double-stranded RNA
           binding protein [Medicago truncatula]
           gi|355481293|gb|AES62496.1| Double-stranded RNA binding
           protein [Medicago truncatula]
           gi|355490390|gb|AES71593.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 424

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 40/83 (48%), Positives = 56/83 (67%)
 Frame = +3

Query: 165 MYKSRLQELCHHKLWGLPNYASTRDGPDHNPKFKASVLINGVSFDTPDFCKSSKEAQNEA 344
           M+K++LQ+LCH + W LP Y +T DGP H P F ASV +NGV+F + D   S+KEAQN+A
Sbjct: 1   MFKTKLQQLCHQRRWSLPKYTATNDGPQHKPSFNASVHVNGVTFASSDAFNSAKEAQNQA 60

Query: 345 AKLAYHHFASSDPLYRPKIILRD 413
           A  A+ +F S    +  ++I RD
Sbjct: 61  AMKAFRNFTSPLSEFAIRLIRRD 83


>ref|XP_003601344.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|355490392|gb|AES71595.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 372

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +3

Query: 165 MYKSRLQELCHHKLWGLPNYASTR-DGPDHNPKFKASVLINGVSFDTPDFCKSSKEAQNE 341
           M+KS+LQELCH + W LP Y++   DGP HNP FK SV +NG++F + D   SS EAQN+
Sbjct: 1   MHKSKLQELCHRRRWSLPKYSAFHVDGPPHNPSFKGSVFVNGLTFTSSDTFNSSGEAQNQ 60

Query: 342 AAKLAYHHFAS 374
           AA  A+ +F S
Sbjct: 61  AAMKAFRNFTS 71


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