BLASTX nr result

ID: Papaver22_contig00024472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024472
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              305   3e-81
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   305   3e-81
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   300   6e-80
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c...   300   1e-79
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   299   2e-79

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  305 bits (780), Expect = 3e-81
 Identities = 149/164 (90%), Positives = 155/164 (94%)
 Frame = +1

Query: 1    DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWPRKRLTN 180
            DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDW RK+L +
Sbjct: 615  DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGD 674

Query: 181  FFMSNNYSWDILAARGVWAFGPDKQGPNILLDDCLPSEVDKNLLNAVKDSIVQGFQWGAR 360
            FF +  Y WD+LAAR +WAFGPDKQGPNILLDD L SEVDKNLLNAVKDSIVQGFQWGAR
Sbjct: 675  FFQTK-YDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAR 733

Query: 361  EGPLCDEPIRNVKFKIVDAKIAPEPLHRGTGQIIPTARRVAYSA 492
            EGPLCDEPIRNVKFKIVDA+IAPEPLHRGTGQIIPTARRVAYSA
Sbjct: 734  EGPLCDEPIRNVKFKIVDARIAPEPLHRGTGQIIPTARRVAYSA 777


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
            [Vitis vinifera] gi|147858113|emb|CAN81413.1|
            hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  305 bits (780), Expect = 3e-81
 Identities = 149/164 (90%), Positives = 155/164 (94%)
 Frame = +1

Query: 1    DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWPRKRLTN 180
            DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDW RK+L +
Sbjct: 672  DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGD 731

Query: 181  FFMSNNYSWDILAARGVWAFGPDKQGPNILLDDCLPSEVDKNLLNAVKDSIVQGFQWGAR 360
            FF +  Y WD+LAAR +WAFGPDKQGPNILLDD L SEVDKNLLNAVKDSIVQGFQWGAR
Sbjct: 732  FFQTK-YDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAR 790

Query: 361  EGPLCDEPIRNVKFKIVDAKIAPEPLHRGTGQIIPTARRVAYSA 492
            EGPLCDEPIRNVKFKIVDA+IAPEPLHRGTGQIIPTARRVAYSA
Sbjct: 791  EGPLCDEPIRNVKFKIVDARIAPEPLHRGTGQIIPTARRVAYSA 834


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
            [Cucumis sativus] gi|449493675|ref|XP_004159406.1|
            PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
            component-like [Cucumis sativus]
          Length = 988

 Score =  300 bits (769), Expect = 6e-80
 Identities = 145/164 (88%), Positives = 155/164 (94%)
 Frame = +1

Query: 1    DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWPRKRLTN 180
            DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLE+GLAEDIENGVVS+DW RK+L +
Sbjct: 672  DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGD 731

Query: 181  FFMSNNYSWDILAARGVWAFGPDKQGPNILLDDCLPSEVDKNLLNAVKDSIVQGFQWGAR 360
            FF +  Y WD+LAAR +WAFGPDKQGPNILLDD L SEVDKNLLNAVKDSIVQGFQWGAR
Sbjct: 732  FFQTK-YEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAR 790

Query: 361  EGPLCDEPIRNVKFKIVDAKIAPEPLHRGTGQIIPTARRVAYSA 492
            EGPLCDEPIRNVKFKIVDA+IAPEPLHRG+GQIIPTARRVAYS+
Sbjct: 791  EGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSS 834


>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
            truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
            nuclear ribonucleoprotein component [Medicago truncatula]
          Length = 983

 Score =  300 bits (767), Expect = 1e-79
 Identities = 145/164 (88%), Positives = 154/164 (93%)
 Frame = +1

Query: 1    DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWPRKRLTN 180
            DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLE+GLAEDIENGVVS DW RK+L  
Sbjct: 672  DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSTDWNRKKLGE 731

Query: 181  FFMSNNYSWDILAARGVWAFGPDKQGPNILLDDCLPSEVDKNLLNAVKDSIVQGFQWGAR 360
            FF +  Y WD+LAAR +WAFGPDKQGPNILLDD LP+EVDK+LLNAVKDSIVQGFQWGAR
Sbjct: 732  FFQTK-YDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAR 790

Query: 361  EGPLCDEPIRNVKFKIVDAKIAPEPLHRGTGQIIPTARRVAYSA 492
            EGPLCDEPIRNVKFKIVDA+IAPEPLHRG+GQIIPTARRVAYSA
Sbjct: 791  EGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSA 834


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
            predicted protein [Populus trichocarpa]
          Length = 869

 Score =  299 bits (765), Expect = 2e-79
 Identities = 146/164 (89%), Positives = 153/164 (93%)
 Frame = +1

Query: 1    DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWPRKRLTN 180
            DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDW RK L +
Sbjct: 622  DPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWNRKALGD 681

Query: 181  FFMSNNYSWDILAARGVWAFGPDKQGPNILLDDCLPSEVDKNLLNAVKDSIVQGFQWGAR 360
            FF +  Y WD+LAAR +WAFGPDKQGPNILLDD LP+EVDK LL AVKDSIVQGFQWGAR
Sbjct: 682  FFKTK-YDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKGLLGAVKDSIVQGFQWGAR 740

Query: 361  EGPLCDEPIRNVKFKIVDAKIAPEPLHRGTGQIIPTARRVAYSA 492
            EGPLCDEPIRNVKFKIVDA+IAPEPLHRG+GQIIPTARRVAYSA
Sbjct: 741  EGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSA 784


Top