BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024305
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   277   6e-73
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   179   2e-43
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]      172   3e-41
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic...   171   6e-41
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]      170   1e-40

>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  277 bits (709), Expect = 6e-73
 Identities = 137/140 (97%), Positives = 138/140 (98%)
 Frame = +1

Query: 1   GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 180
           GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK
Sbjct: 360 GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 419

Query: 181 VKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFL 360
           VKATCPARGH SLSPAEIL+LVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFL
Sbjct: 420 VKATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFL 479

Query: 361 GKCITSLKNTRRDLQLDGEK 420
           GKCITSLKNTRRDLQLDG K
Sbjct: 480 GKCITSLKNTRRDLQLDGVK 499


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  179 bits (454), Expect = 2e-43
 Identities = 92/141 (65%), Positives = 109/141 (77%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 180
           GYMSRRL+K+LEDLS +YD TVR++SGG+VQ LYGDDGMDP+ MEGK+G PLNLDRL+MK
Sbjct: 362 GYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMK 421

Query: 181 VKATCPA-RGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGF 357
            KAT PA R H SLSP+EIL+    RLSKHDMTPEGGCS AFK+SL D           F
Sbjct: 422 TKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFKESLSD-----------F 470

Query: 358 LGKCITSLKNTRRDLQLDGEK 420
           L KC+ +L+ TRR+L LD +K
Sbjct: 471 LKKCVVALRKTRRELGLDEDK 491


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/131 (67%), Positives = 99/131 (75%)
 Frame = +1

Query: 1   GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 180
           GYMSRRL+KALEDLS HYD TVR+ASGG+VQ LYGDD MDP  MEGK+GTPLNLDR+ MK
Sbjct: 362 GYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDAMDPVNMEGKNGTPLNLDRILMK 421

Query: 181 VKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFL 360
            KATCPA G FSLSP+EI + V  RLSKHDMTPEGGCS AFK SL             FL
Sbjct: 422 AKATCPANGAFSLSPSEISKRVEDRLSKHDMTPEGGCSAAFKNSLAQ-----------FL 470

Query: 361 GKCITSLKNTR 393
            K I+ ++NTR
Sbjct: 471 EKQISLIQNTR 481


>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
          Length = 544

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/136 (63%), Positives = 105/136 (77%)
 Frame = +1

Query: 1   GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 180
           GYMSRRL+K+LEDLS++YD TVRS++GGVVQF+YGDDGMDP++MEG++GTPLNLD+LY K
Sbjct: 360 GYMSRRLMKSLEDLSLYYDQTVRSSNGGVVQFIYGDDGMDPAKMEGENGTPLNLDQLYKK 419

Query: 181 VKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFL 360
           V ATCP R   SLSP+EI+ L+  RLSK+DMTPEGGCS AFK  LLD           FL
Sbjct: 420 VMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSSAFKNLLLD-----------FL 468

Query: 361 GKCITSLKNTRRDLQL 408
            K +  L+ TR  LQL
Sbjct: 469 HKHVAELRKTRIRLQL 484


>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
          Length = 548

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/105 (80%), Positives = 88/105 (83%)
 Frame = +1

Query: 1   GYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMK 180
           GYMSRRL+KALEDLS HYD TVR+ASGG+VQ LYGDDGMDP  MEGKDGTPLNLDRL MK
Sbjct: 362 GYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDGMDPVNMEGKDGTPLNLDRLLMK 421

Query: 181 VKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSL 315
            KA CPA G  SLSPAEI + V  RLSKHDMTPEGGCS AFK SL
Sbjct: 422 TKAICPANGVISLSPAEISKRVEERLSKHDMTPEGGCSAAFKNSL 466