BLASTX nr result

ID: Papaver22_contig00024181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024181
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   222   2e-56
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              222   2e-56
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-55
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   214   5e-54
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   214   5e-54

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  222 bits (566), Expect = 2e-56
 Identities = 112/178 (62%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 RLQFVECPDDINAMIDAAKYADVVLLLVDASYGFEAETFEFLNLLQAHGFPKIMGVFTHV 354
           RLQFVECP+DIN MIDAAK+AD+ LLL+D SYGFE ETFEFLN+LQ HGFPK+MGV TH+
Sbjct: 131 RLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHL 190

Query: 353 DELQDDTELNRTKQ-LQDQFQTEICQAAKVTYLSGLGDHKLYKEYEIQQLAECISMIRFI 177
           D+ +D  +L +TKQ L+ +F TEI   AK+ YLSGL  H  Y + EI  LA  IS+++  
Sbjct: 191 DKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGL-VHGKYPKREIHNLARFISVMK-- 247

Query: 176 SPFIPSSWKAAHPYVLVDCFEDVTPLEKVQKDANCKRNISLYGYLRGCNIKSGAKVHI 3
             F P SW+A+HPY+LVD FEDVTP E+VQ +  C RNI+LYGYLRGCN+K G KVHI
Sbjct: 248 --FHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHI 303


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  222 bits (566), Expect = 2e-56
 Identities = 112/178 (62%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 RLQFVECPDDINAMIDAAKYADVVLLLVDASYGFEAETFEFLNLLQAHGFPKIMGVFTHV 354
           RLQFVECP+DIN MIDAAK+AD+ LLL+D SYGFE ETFEFLN+LQ HGFPK+MGV TH+
Sbjct: 131 RLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHL 190

Query: 353 DELQDDTELNRTKQ-LQDQFQTEICQAAKVTYLSGLGDHKLYKEYEIQQLAECISMIRFI 177
           D+ +D  +L +TKQ L+ +F TEI   AK+ YLSGL  H  Y + EI  LA  IS+++  
Sbjct: 191 DKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGL-VHGKYPKREIHNLARFISVMK-- 247

Query: 176 SPFIPSSWKAAHPYVLVDCFEDVTPLEKVQKDANCKRNISLYGYLRGCNIKSGAKVHI 3
             F P SW+A+HPY+LVD FEDVTP E+VQ +  C RNI+LYGYLRGCN+K G KVHI
Sbjct: 248 --FHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHI 303


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  218 bits (556), Expect = 3e-55
 Identities = 111/178 (62%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 RLQFVECPDDINAMIDAAKYADVVLLLVDASYGFEAETFEFLNLLQAHGFPKIMGVFTHV 354
           R+QFVECP+DIN MIDAAK+AD+ LLL+D SYGFE ETFEFLN+LQ HGFPKIMGV TH+
Sbjct: 128 RVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKIMGVLTHL 187

Query: 353 DELQDDTELNRTKQ-LQDQFQTEICQAAKVTYLSGLGDHKLYKEYEIQQLAECISMIRFI 177
           D+ +D  +L +TKQ L+ +F TEI   AK+ YLSGL  H  Y + EI  LA  IS+++  
Sbjct: 188 DQFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGL-IHGKYVKREIHNLARFISVMK-- 244

Query: 176 SPFIPSSWKAAHPYVLVDCFEDVTPLEKVQKDANCKRNISLYGYLRGCNIKSGAKVHI 3
             F P SW+ +HPYVL D FEDVTP E+V+ D  C RNI+LYGYLRGCN+K G KVHI
Sbjct: 245 --FHPLSWRTSHPYVLADRFEDVTPPERVRVDNKCDRNITLYGYLRGCNLKRGTKVHI 300


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  214 bits (546), Expect = 5e-54
 Identities = 108/178 (60%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 RLQFVECPDDINAMIDAAKYADVVLLLVDASYGFEAETFEFLNLLQAHGFPKIMGVFTHV 354
           RLQFVECP+DIN MIDAAKYAD+ LLL+D SYGFE ETFEFLN+LQ HGFPK+MGV TH+
Sbjct: 128 RLQFVECPNDINGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHL 187

Query: 353 DELQDDTELNRTKQ-LQDQFQTEICQAAKVTYLSGLGDHKLYKEYEIQQLAECISMIRFI 177
           D  +D  +L +TKQ L+ +F TEI   AK+ YLSGL  H  Y + E+  LA  IS+++  
Sbjct: 188 DGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGL-IHGKYVKREVHNLARFISVMK-- 244

Query: 176 SPFIPSSWKAAHPYVLVDCFEDVTPLEKVQKDANCKRNISLYGYLRGCNIKSGAKVHI 3
             F P SW+ +HPYVLVD FED+TP E+V  +  C R ++LYGYLRGCN+K G KVHI
Sbjct: 245 --FHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHI 300


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  214 bits (546), Expect = 5e-54
 Identities = 108/178 (60%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 RLQFVECPDDINAMIDAAKYADVVLLLVDASYGFEAETFEFLNLLQAHGFPKIMGVFTHV 354
           RLQFVECP+DIN MIDAAKYAD+ LLL+D SYGFE ETFEFLN+LQ HGFPK+MGV TH+
Sbjct: 128 RLQFVECPNDINGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHL 187

Query: 353 DELQDDTELNRTKQ-LQDQFQTEICQAAKVTYLSGLGDHKLYKEYEIQQLAECISMIRFI 177
           D  +D  +L +TKQ L+ +F TEI   AK+ YLSGL  H  Y + E+  LA  IS+++  
Sbjct: 188 DGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGL-IHGKYVKREVHNLARFISVMK-- 244

Query: 176 SPFIPSSWKAAHPYVLVDCFEDVTPLEKVQKDANCKRNISLYGYLRGCNIKSGAKVHI 3
             F P SW+ +HPYVLVD FED+TP E+V  +  C R ++LYGYLRGCN+K G KVHI
Sbjct: 245 --FHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHI 300


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