BLASTX nr result

ID: Papaver22_contig00024048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024048
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]   215   9e-54
ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...   213   6e-53
ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...   211   1e-52
ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...   207   2e-51
ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Gly...   202   6e-50

>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score =  215 bits (548), Expect = 9e-54
 Identities = 116/189 (61%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = +1

Query: 208 SSSSRCLARKILAVRPALAHPLASLLYPSYSANVHEPSATLQNFCWTSTITSRVFCSRRL 387
           SSSS   +   L+VRP +   L     PS  A ++     L++F    ++ SR FCSR L
Sbjct: 24  SSSSSSSSSSSLSVRPYVF--LLEASRPSDLAKIN-----LRSFL---SVASRSFCSRTL 73

Query: 388 NL-DEAQGPAPIDYGSLLREDEFHTLADSTIHDLQEKFEEYGDSVELDGFDVDYGNQVLT 564
           +L D++QGPA IDY SLL+EDEFH +ADSTI DLQEKFEEYGD V++DGFD+DYGNQVLT
Sbjct: 74  DLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQIDGFDIDYGNQVLT 133

Query: 565 LKLGGLGTYVMNKQTPNRQIWMSSPVSGPSRFDWDKSSGAWVYRRTKAKXXXXXXXXXXX 744
           LKLG LGTYV+NKQTPNRQIW+SSPVSGPSRFDWD+S+ AWVYRRTKA            
Sbjct: 134 LKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTKANLSKLLETELEK 193

Query: 745 XCGKPISLS 771
            CG PISLS
Sbjct: 194 LCGTPISLS 202


>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  213 bits (541), Expect = 6e-53
 Identities = 114/197 (57%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
 Frame = +1

Query: 187 SKKMAYFSSSSRCLARKILAVRPALA-HPLASLLYPSYSANVHEPSATLQNFCWTSTITS 363
           S K+ +    SR L     +   +L+  P   LL  S  +++ +    L++F    ++ S
Sbjct: 6   SSKLLFLRRLSRALKLSSSSSSSSLSVRPYVFLLEASRPSDLAK--INLRSFL---SVAS 60

Query: 364 RVFCSRRLNL-DEAQGPAPIDYGSLLREDEFHTLADSTIHDLQEKFEEYGDSVELDGFDV 540
           R FCSR L+L D++QGPA IDY SLL+EDEFH +ADSTI DLQEKFEEYGD V++DGFD+
Sbjct: 61  RSFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQIDGFDI 120

Query: 541 DYGNQVLTLKLGGLGTYVMNKQTPNRQIWMSSPVSGPSRFDWDKSSGAWVYRRTKAKXXX 720
           DYGNQVLTLKLG LGTYV+NKQTPNRQIW+SSPVSGPSRFDWD+S+ AWVYRRTKA    
Sbjct: 121 DYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTKANLSK 180

Query: 721 XXXXXXXXXCGKPISLS 771
                    CG PISLS
Sbjct: 181 LLETELEKLCGTPISLS 197


>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score =  211 bits (538), Expect = 1e-52
 Identities = 110/180 (61%), Positives = 130/180 (72%), Gaps = 12/180 (6%)
 Frame = +1

Query: 268 PLASLLYPSYSANVH-------EPSATLQNFCWTSTI----TSRVFCSRRLNLD-EAQGP 411
           PL SL   SYS+  H       E S  L ++     +    +SR FCSR LNLD  +QGP
Sbjct: 22  PLHSLS-TSYSSKFHHLRPLFLEASRALNHYSNAPDLLHSSSSRDFCSRPLNLDAHSQGP 80

Query: 412 APIDYGSLLREDEFHTLADSTIHDLQEKFEEYGDSVELDGFDVDYGNQVLTLKLGGLGTY 591
           A IDY SLL+EDEFH LADSTIHDLQEKFEEYGD V++DGFD+DYGN+VLTLKLG LGTY
Sbjct: 81  ATIDYSSLLQEDEFHKLADSTIHDLQEKFEEYGDGVQIDGFDIDYGNEVLTLKLGDLGTY 140

Query: 592 VMNKQTPNRQIWMSSPVSGPSRFDWDKSSGAWVYRRTKAKXXXXXXXXXXXXCGKPISLS 771
           V+NKQTPNRQ+W+SSPVSGPSR+DWD+++ AWVYRRTKA             CG+PI L+
Sbjct: 141 VLNKQTPNRQLWLSSPVSGPSRYDWDRNAEAWVYRRTKANLFEVLESELEQVCGEPIKLA 200


>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  207 bits (528), Expect = 2e-51
 Identities = 96/138 (69%), Positives = 109/138 (78%)
 Frame = +1

Query: 358 TSRVFCSRRLNLDEAQGPAPIDYGSLLREDEFHTLADSTIHDLQEKFEEYGDSVELDGFD 537
           +SR FCSR  NLDE+QGP  IDY SLL+E EFH LADSTIH LQEK E+YGDSVE+DGFD
Sbjct: 54  SSRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVDGFD 113

Query: 538 VDYGNQVLTLKLGGLGTYVMNKQTPNRQIWMSSPVSGPSRFDWDKSSGAWVYRRTKAKXX 717
           +DYGN VLT+KLG LGTYV+NKQTPNRQ+W+SSPVSGPSRFDWD+ + AW+YRR KA   
Sbjct: 114 IDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAWIYRRNKANLY 173

Query: 718 XXXXXXXXXXCGKPISLS 771
                     CGKPI LS
Sbjct: 174 KILEGEFEQLCGKPIDLS 191


>ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  202 bits (515), Expect = 6e-50
 Identities = 94/137 (68%), Positives = 107/137 (78%)
 Frame = +1

Query: 361 SRVFCSRRLNLDEAQGPAPIDYGSLLREDEFHTLADSTIHDLQEKFEEYGDSVELDGFDV 540
           SR FCSR  NL E+QGP  IDY SLL+E EFH LADSTIH LQEK E+YGDSVE+DGFD+
Sbjct: 55  SRNFCSRSFNLHESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVDGFDI 114

Query: 541 DYGNQVLTLKLGGLGTYVMNKQTPNRQIWMSSPVSGPSRFDWDKSSGAWVYRRTKAKXXX 720
           DYGN VLT+KLG LGTYV+NKQTPNRQ+W+SSP+SGPSRFDWD+ + AW+YRR KA    
Sbjct: 115 DYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPMSGPSRFDWDRDTKAWIYRRNKANLYK 174

Query: 721 XXXXXXXXXCGKPISLS 771
                    CGKPI LS
Sbjct: 175 ILEGELEQLCGKPIVLS 191


Top