BLASTX nr result

ID: Papaver22_contig00023458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023458
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...   220   2e-55
ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation fa...   217   2e-54
ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation fa...   216   3e-54
ref|XP_002305359.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
gb|ABG89128.1| UFD2 [synthetic construct]                             209   3e-52

>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
            vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
            product [Vitis vinifera]
          Length = 1037

 Score =  220 bits (560), Expect = 2e-55
 Identities = 112/134 (83%), Positives = 123/134 (91%)
 Frame = +3

Query: 3    SYNEQLFTAAAAILHRIGEDGRMIQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQ 182
            SYNEQLF+AAA +L RIGEDGR+IQEF ELG +AK+AASEAMDAEA LGEIPDEFLDPIQ
Sbjct: 888  SYNEQLFSAAADVLRRIGEDGRIIQEFSELGARAKVAASEAMDAEAALGEIPDEFLDPIQ 947

Query: 183  YTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKAKIVEFIRS 362
            YTLMKDPVILPSSRITVDRPVIQRHLLSDN+DPFNRSHLT DMLIP++ELKA+I EFIRS
Sbjct: 948  YTLMKDPVILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTSDMLIPNIELKARIEEFIRS 1007

Query: 363  QGLKKHSSEGLNKE 404
            Q LKKH +EGL  +
Sbjct: 1008 QELKKH-AEGLTMQ 1020


>ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1038

 Score =  217 bits (553), Expect = 2e-54
 Identities = 107/128 (83%), Positives = 119/128 (92%)
 Frame = +3

Query: 3    SYNEQLFTAAAAILHRIGEDGRMIQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQ 182
            SYN+QLF+A A +LHRIGEDGR+IQEF++LG KAK+AASEAMD EATLGEIPDEFLDPIQ
Sbjct: 892  SYNDQLFSAGADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDTEATLGEIPDEFLDPIQ 951

Query: 183  YTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKAKIVEFIRS 362
            YTLMKDPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLT DMLIPD ELKA+I EF+RS
Sbjct: 952  YTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDDELKARIEEFVRS 1011

Query: 363  QGLKKHSS 386
            Q +KKH S
Sbjct: 1012 QEMKKHLS 1019


>ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1036

 Score =  216 bits (551), Expect = 3e-54
 Identities = 107/128 (83%), Positives = 119/128 (92%)
 Frame = +3

Query: 3    SYNEQLFTAAAAILHRIGEDGRMIQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQ 182
            SYN+QLF+A A +LHRIGEDGR+IQEF++LG KAK+AASEAMDAEATLGEIPDEFLDPIQ
Sbjct: 890  SYNDQLFSAGADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQ 949

Query: 183  YTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKAKIVEFIRS 362
            YTLMKDPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLT DMLIPD  LKA+I EF+RS
Sbjct: 950  YTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDDALKARIEEFVRS 1009

Query: 363  QGLKKHSS 386
            Q +KKH S
Sbjct: 1010 QEMKKHLS 1017


>ref|XP_002305359.1| predicted protein [Populus trichocarpa] gi|222848323|gb|EEE85870.1|
            predicted protein [Populus trichocarpa]
          Length = 930

 Score =  213 bits (543), Expect = 2e-53
 Identities = 106/129 (82%), Positives = 116/129 (89%)
 Frame = +3

Query: 3    SYNEQLFTAAAAILHRIGEDGRMIQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQ 182
            SYNEQLFTAA  +L RIGEDGR+IQEF+ELG KA++AA EAMDAEA LGEIPDEFLDPIQ
Sbjct: 782  SYNEQLFTAAVDVLRRIGEDGRVIQEFIELGTKARVAACEAMDAEAALGEIPDEFLDPIQ 841

Query: 183  YTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKAKIVEFIRS 362
             TLMKDPVILPSSRITVDRPVIQRHLLSDN+DPFNRSHLT DMLIP+ ELKA+I EF+RS
Sbjct: 842  CTLMKDPVILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTVDMLIPNTELKARIKEFVRS 901

Query: 363  QGLKKHSSE 389
            Q LKKH  +
Sbjct: 902  QELKKHGED 910


>gb|ABG89128.1| UFD2 [synthetic construct]
          Length = 1037

 Score =  209 bits (533), Expect = 3e-52
 Identities = 105/136 (77%), Positives = 118/136 (86%), Gaps = 2/136 (1%)
 Frame = +3

Query: 3    SYNEQLFTAAAAILHRIGEDGRMIQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQ 182
            SYNEQLF A A +L RIGE+GR+IQEF+ELG KAK AASEA+DAEA LGEIPDEFLDPIQ
Sbjct: 890  SYNEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQ 949

Query: 183  YTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKAKIVEFIRS 362
            YTLM+DPVILPSSRITVDRP+IQRHLLSDN DPFNR+HLT DMLIPD+ELKAKI EF++S
Sbjct: 950  YTLMRDPVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKS 1009

Query: 363  QGLKKHSS--EGLNKE 404
               KK +S  +  NKE
Sbjct: 1010 HQSKKRTSGEDSSNKE 1025


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