BLASTX nr result

ID: Papaver22_contig00023431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023431
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   107   1e-21
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   107   1e-21
ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chlorop...   103   1e-20
ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   102   2e-20
gb|ACU23303.1| unknown [Glycine max]                                  102   2e-20

>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|302142004|emb|CBI19207.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/105 (52%), Positives = 75/105 (71%)
 Frame = +3

Query: 27  TKFNVFVGNLSWDVTSSDLREFFSSLNDNVVSAEVIYQTTELRKPSGYGFVSFGSKEEAE 206
           T +N+F+ NL +   + DLREFFSS N NVVSAEVI+     R+ SGYGFVSFGSKEEA+
Sbjct: 181 TPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENP-RRSSGYGFVSFGSKEEAD 239

Query: 207 AAITAFKGKILMGRPLRLARSRRKLKEEVKAGTTFGGTSSEVNED 341
            A+++F+G++ MGRPLR+ARSRR +K E K        ++ +N +
Sbjct: 240 TALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVANPLNSN 284


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/105 (52%), Positives = 75/105 (71%)
 Frame = +3

Query: 27  TKFNVFVGNLSWDVTSSDLREFFSSLNDNVVSAEVIYQTTELRKPSGYGFVSFGSKEEAE 206
           T +N+F+ NL +   + DLREFFSS N NVVSAEVI+     R+ SGYGFVSFGSKEEA+
Sbjct: 181 TPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENP-RRSSGYGFVSFGSKEEAD 239

Query: 207 AAITAFKGKILMGRPLRLARSRRKLKEEVKAGTTFGGTSSEVNED 341
            A+++F+G++ MGRPLR+ARSRR +K E K        ++ +N +
Sbjct: 240 TALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVANPLNSN 284


>ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 297

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 5/120 (4%)
 Frame = +3

Query: 6   REAPPAPTK-----FNVFVGNLSWDVTSSDLREFFSSLNDNVVSAEVIYQTTELRKPSGY 170
           +E  P P K     FN+FV NLS++ ++ DL+EFF S    VVSAEV+Y+    R+PSGY
Sbjct: 150 KEKTPPPVKPKVVTFNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNP-RRPSGY 208

Query: 171 GFVSFGSKEEAEAAITAFKGKILMGRPLRLARSRRKLKEEVKAGTTFGGTSSEVNED*AE 350
           GFVS+ SK+EAEAA+  F+GKI MGRP+R+ R RR +++          T S+++ + AE
Sbjct: 209 GFVSYKSKKEAEAALAEFQGKIFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSDLSVNGAE 268


>ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
           max]
          Length = 315

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/111 (48%), Positives = 74/111 (66%)
 Frame = +3

Query: 18  PAPTKFNVFVGNLSWDVTSSDLREFFSSLNDNVVSAEVIYQTTELRKPSGYGFVSFGSKE 197
           P    FN+FV NLS++ +S DL+EFF      VVSAEV+Y+    R+PSGYGFVSF SK+
Sbjct: 177 PKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNP-RRPSGYGFVSFKSKK 235

Query: 198 EAEAAITAFKGKILMGRPLRLARSRRKLKEEVKAGTTFGGTSSEVNED*AE 350
           EAEAA+  F+GK+ MGRP+R+ R RR +++          T SE++ + AE
Sbjct: 236 EAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSELSVNGAE 286


>gb|ACU23303.1| unknown [Glycine max]
          Length = 315

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/111 (48%), Positives = 74/111 (66%)
 Frame = +3

Query: 18  PAPTKFNVFVGNLSWDVTSSDLREFFSSLNDNVVSAEVIYQTTELRKPSGYGFVSFGSKE 197
           P    FN+FV NLS++ +S DL+EFF      VVSAEV+Y+    R+PSGYGFVSF SK+
Sbjct: 177 PKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNP-RRPSGYGFVSFKSKK 235

Query: 198 EAEAAITAFKGKILMGRPLRLARSRRKLKEEVKAGTTFGGTSSEVNED*AE 350
           EAEAA+  F+GK+ MGRP+R+ R RR +++          T SE++ + AE
Sbjct: 236 EAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSELSVNGAE 286


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