BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023427
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   354   3e-95
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   347   5e-93
ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   340   5e-91
ref|XP_002334451.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   334   3e-89

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  354 bits (908), Expect = 3e-95
 Identities = 206/413 (49%), Positives = 275/413 (66%), Gaps = 7/413 (1%)
 Frame = +3

Query: 66   KKDAQQS-SISTEAKVNSYDHKKNTPAKKKHN--SRNKEQIQNKNDTKVLSGATKAADST 236
            +KDA  S SIST    N+    K T  ++K +   +NKEQ+ + +     S       ST
Sbjct: 232  RKDADLSPSISTSPVSNNNRGSKATEKQRKQSRTKKNKEQVTSTD----ASSDVAQKKST 287

Query: 237  GVTLLEKKPNIDIHSRHSQTSNSVPVCGKQLPAVDSPGSEHQQSEKKRTIFTEKNRALKK 416
              +    K NI   S+  Q S +     K + A+DS  S   QS+K      +K ++ K 
Sbjct: 288  KSSSEANKSNITKKSQSPQASKNNSTGNKPVEALDSSVSTKSQSKKATGSSNKKGKSPKV 347

Query: 417  DPTSKNSDKVSLQQSNSVPGKLEPPIKKLSPLYPPTGKSVVVVESLKKAKIVQGYLGDLF 596
               +++  K ++     +    + P+KKL   YP +GKSVVVVES+ KAK++QGYLGD++
Sbjct: 348  --ANESPKKQTVHTMGKIKSLEQRPLKKL---YPSSGKSVVVVESVTKAKVIQGYLGDMY 402

Query: 597  EVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVALNGAKNLILASDPSC 776
            EVL S GHVR LA  +G+VRPDDDFSMVW VP AAWT +KS+KVAL GA+NLILASDP  
Sbjct: 403  EVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDPDR 462

Query: 777  EGEAIAWHLTEMLQQQDALHDNITIARVVFNELTESSVKAALQSPRVINMDLVHSYLSRR 956
            EGEAIAWH+ EML QQDALH ++T+ARVVF+E+TESS+K+AL +PR I+++LVH+YL+RR
Sbjct: 463  EGEAIAWHIIEMLLQQDALHKDLTVARVVFHEITESSIKSALDAPREIDVNLVHAYLARR 522

Query: 957  ALDYLIAYILTPLLDKKLPGCLSAGRVEHTALSLLCDAETQIDEFKPREYWTVEVEFSNK 1136
            ALDYLI + ++PLL +KLPGC SAGRV+  AL+L+CD E +IDEFKP+EYWTVEVEF+ K
Sbjct: 523  ALDYLIGFNISPLLWRKLPGCQSAGRVQSAALALICDREMEIDEFKPQEYWTVEVEFNRK 582

Query: 1137 IVDSLKKNFSIKSHLINARSKQLEQLS----TKATDIQKKITSSCFKVAGCKR 1283
               S+   F   S+L +  SK+L Q S    T+A  I+++I S  FKV G KR
Sbjct: 583  QGSSMNSKF-FPSYLTHFDSKKLNQFSISSHTEAKAIEQEINSLEFKVIGSKR 634


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  347 bits (889), Expect = 5e-93
 Identities = 207/426 (48%), Positives = 276/426 (64%), Gaps = 20/426 (4%)
 Frame = +3

Query: 66   KKDAQQS-SISTEAKVNSYDHKKNTPAKKKHN--SRNKEQIQNKNDTKVLSGATKAADST 236
            +KD   S SIST    N+    K T  ++K +   +NKEQ+ + +     S       ST
Sbjct: 232  RKDVDLSPSISTSPVSNNNRGSKATEKQRKQSRTKKNKEQVTSTD----ASSDVAQKKST 287

Query: 237  GVTLLEKKPNIDIHSRHSQTSN--SVPVC-----------GKQLPAVDSPGSEHQQSEKK 377
              +    K NI   S+  Q S    V +C            K + A+DS  S   QS+K 
Sbjct: 288  KSSSEANKSNITKKSQSPQASKVRHVSICIYELFQNNSTGNKPVEALDSSVSTKSQSKKA 347

Query: 378  RTIFTEKNRALKKDPTSKNSDKVSLQQSNSVPGKLEPPIKKLSPLYPPTGKSVVVVESLK 557
                 +K ++ K    +++  K ++     +    + P+KKL   YP +GKSVVVVES+ 
Sbjct: 348  TGSSNKKGKSPKV--ANESPKKQTVHTMGKIKSLEQRPLKKL---YPSSGKSVVVVESVT 402

Query: 558  KAKIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVALN 737
            KAK++QGYLGD++EVL S GHVR LA  +G+VRPDDDFSMVW VP AAWT +KS+KVAL 
Sbjct: 403  KAKVIQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALG 462

Query: 738  GAKNLILASDPSCEGEAIAWHLTEMLQQQDALHDNITIARVVFNELTESSVKAALQSPRV 917
            GA+NLILASDP  EGEAIAWH+ EML QQDALH ++T+ARVVF+E+TESS+K+AL +PR 
Sbjct: 463  GAENLILASDPDREGEAIAWHIIEMLLQQDALHKDLTVARVVFHEITESSIKSALDAPRE 522

Query: 918  INMDLVHSYLSRRALDYLIAYILTPLLDKKLPGCLSAGRVEHTALSLLCDAETQIDEFKP 1097
            I+++LVH+YL+RRALDYLI + ++PLL +KLPGC SAGRV+  AL+L+CD E +IDEFKP
Sbjct: 523  IDVNLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALALICDREMEIDEFKP 582

Query: 1098 REYWTVEVEFSNKIVDSLKKNFSIKSHLINARSKQLEQLS----TKATDIQKKITSSCFK 1265
            +EYWTVEVEF+ K   S+   F   S+L +  SK+L Q S    T+A  I+++I S  FK
Sbjct: 583  QEYWTVEVEFNRKQGSSMNSKF-FPSYLTHFDSKKLNQFSISSHTEAKAIEQEINSLEFK 641

Query: 1266 VAGCKR 1283
            V G KR
Sbjct: 642  VIGSKR 647


>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 1284

 Score =  340 bits (872), Expect = 5e-91
 Identities = 194/423 (45%), Positives = 279/423 (65%), Gaps = 6/423 (1%)
 Frame = +3

Query: 30   DTLKPTEVRVGDKKDAQQSSISTEAKVNSYDHKKNTPAKKKHNSRNKEQIQNKNDTKVLS 209
            + +  TE  +GD     ++ +ST A   S  ++  T  K K   +NK+ +++K+ + V  
Sbjct: 321  EVVTSTEPVIGDGSSGIKAELSTAASPASNGNQATT-VKSKRRPKNKK-VEDKSSSVVPV 378

Query: 210  GATKAADSTGVTLLEKKPNIDIHSRHSQTSNSVPVCGKQLPAVD--SPGSEHQQSEKKRT 383
                + D + +++ + K +    S + ++S++     K  P  +  SP   + +SE++  
Sbjct: 379  LEAVSLDESPISVPKPKHS---GSGNRKSSSAKKEVAKNHPVEEPKSPAPSNSKSEQQHL 435

Query: 384  IFTEKNRALKKDPTSKNSDKVSLQQSNSVPGKLEPPIKKLSPLYPPTGKSVVVVESLKKA 563
              T+ ++A K+         V     NS+  + +   K   PLYPP+GKSV+VVES+ KA
Sbjct: 436  KSTKASKAPKQK-------LVPQHMKNSIEHRGQNASK---PLYPPSGKSVIVVESMTKA 485

Query: 564  KIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVALNGA 743
            KI+QGYLGD++EVL S GH+R LA  +G+VRPDDDFSMVW VP +AWT +KS+KVALNGA
Sbjct: 486  KIIQGYLGDMYEVLPSYGHIRDLATRSGSVRPDDDFSMVWEVPSSAWTHIKSIKVALNGA 545

Query: 744  KNLILASDPSCEGEAIAWHLTEMLQQQDALHDNITIARVVFNELTESSVKAALQSPRVIN 923
            +NLILASDP  EGEAIAWH+ EMLQQQ ALH+++T+ARVVF+E+TES++K+ALQSPR I+
Sbjct: 546  ENLILASDPDREGEAIAWHIIEMLQQQGALHESMTVARVVFHEITESAIKSALQSPREID 605

Query: 924  MDLVHSYLSRRALDYLIAYILTPLLDKKLPGCLSAGRVEHTALSLLCDAETQIDEFKPRE 1103
             DLVH+YL+RRALDYLI + ++PLL +KLPGC SAGRV+  AL+L+CD E++ID FKP+E
Sbjct: 606  GDLVHAYLARRALDYLIGFNISPLLWRKLPGCPSAGRVQSAALALVCDRESEIDGFKPQE 665

Query: 1104 YWTVEVEFSNKIVDSLKKNFSIKSHLINARSKQLEQLS----TKATDIQKKITSSCFKVA 1271
            YWTV ++   K       + +  +HL +  SK+L QLS      A DI+++I S  F V 
Sbjct: 666  YWTVGIKVKGK-----DNSATFSAHLTSLNSKRLNQLSISSEANAQDIEQRIKSEGFLVK 720

Query: 1272 GCK 1280
            G K
Sbjct: 721  GTK 723


>ref|XP_002334451.1| predicted protein [Populus trichocarpa] gi|222872210|gb|EEF09341.1|
            predicted protein [Populus trichocarpa]
          Length = 780

 Score =  338 bits (866), Expect = 2e-90
 Identities = 201/428 (46%), Positives = 274/428 (64%), Gaps = 8/428 (1%)
 Frame = +3

Query: 27   VDTLKPTEVRVGDKK--DAQQSSISTEAKVNSYDHKKNTPAKKKHNSRNKEQIQNKNDTK 200
            VD +  TE  VGD K   A   + + ++KVN  + KK + +KK           NK +  
Sbjct: 169  VDAVTSTETAVGDAKLGSAVSRTRNKKSKVNETE-KKESKSKK-----------NKGEAS 216

Query: 201  VLSGATKAADSTGVTLLEK-KPNIDIHSRHSQTSNSVPVCGKQLPAVDSPGSEHQQSEKK 377
              + + KAA +  +T   + K ++   S       S     +++P     GS  QQS KK
Sbjct: 217  FTAVSEKAAGAKSMTTTSQLKKSLPSKSGQVAARASQKKATEEMPN----GSTKQQSNKK 272

Query: 378  RTIFTEKNRALKKDPTSKNSDKVSLQQSNSVPGKLEPPIK-KLSPLYPPTGKSVVVVESL 554
                   N ++K+      +     Q+   + GKL+P  + KL  LYP  GK VVVVES+
Sbjct: 273  NG-----NSSIKRTTKKAVNGSAEKQKPQKI-GKLQPFAQGKLKSLYPSAGKCVVVVESV 326

Query: 555  KKAKIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVAL 734
             KAK++QGYLGD++EVL S GHVR LA  +G+VRPDDDFS+VW VP AAWT + S+KVAL
Sbjct: 327  TKAKVIQGYLGDMYEVLPSYGHVRDLAARSGSVRPDDDFSIVWEVPSAAWTHLNSIKVAL 386

Query: 735  NGAKNLILASDPSCEGEAIAWHLTEMLQQQDALHDNITIARVVFNELTESSVKAALQSPR 914
            +GAK LILASDP  EGEAIAWH+ EMLQQQDAL  ++T+ARVVF+E+TE+S+K ALQ+PR
Sbjct: 387  SGAKILILASDPDREGEAIAWHIVEMLQQQDALRQDLTVARVVFHEITETSIKNALQAPR 446

Query: 915  VINMDLVHSYLSRRALDYLIAYILTPLLDKKLPGCLSAGRVEHTALSLLCDAETQIDEFK 1094
             I+++LVH+YL+RRALDYLI + ++PLL +KLPGC SAGRV+  ALSLLCD E +IDEF 
Sbjct: 447  GIDVNLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLLCDREMEIDEFN 506

Query: 1095 PREYWTVEVEFSNKIVDSLKKNFSIKSHLINARSKQLEQLS----TKATDIQKKITSSCF 1262
             +EYWT+  +   +  DSL     + +HL +  SK+L Q S    T+A D+++KI S+ F
Sbjct: 507  SQEYWTIGAKLKKQEQDSL-----VNAHLTHFDSKKLNQFSISSDTEAKDMEQKINSADF 561

Query: 1263 KVAGCKRT 1286
            +V G K+T
Sbjct: 562  QVVGSKKT 569


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  334 bits (856), Expect = 3e-89
 Identities = 193/419 (46%), Positives = 257/419 (61%), Gaps = 4/419 (0%)
 Frame = +3

Query: 42   PTEVRVGDKKDAQQSSISTEAKVNSYDHKKNTPAKKKHNSRNKEQIQNKNDTKVLSGATK 221
            PTE   GD      + ++T        + K TP   +H   +K            + + K
Sbjct: 160  PTEQSSGDVNLDSTAPVTTP-------NSKPTPTTTRHKKHSK------------TNSKK 200

Query: 222  AADSTGVTLLEKKPNIDIHSRHSQTSNSVPVCGKQLPAVDSPGSEHQQSEKKRTIFTEKN 401
               ST V            +  ++TS+S     K    +D+  S   Q  KK    T K 
Sbjct: 201  QQSSTSVE----------EAAQAKTSSSTKTKTKPKELLDASASTKPQPNKKTRKPTGKP 250

Query: 402  RALKKDPTSKNSDKVSLQQSNSVPGKLEPPIKKLSPLYPPTGKSVVVVESLKKAKIVQGY 581
            +A+K    S +  +       S P +       L PLYPPT KSVVVVES+ KAK++QGY
Sbjct: 251  KAIKTVKVSPDKQQQHKPMHKSKPFRQG----SLKPLYPPTAKSVVVVESVTKAKVIQGY 306

Query: 582  LGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVALNGAKNLILA 761
            LG +FEVL S GHVR LA  +G+VRPDDDFSMVW VP  AWT +K++KVALNGA+NL+LA
Sbjct: 307  LGPMFEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKTIKVALNGAENLVLA 366

Query: 762  SDPSCEGEAIAWHLTEMLQQQDALHDNITIARVVFNELTESSVKAALQSPRVINMDLVHS 941
            SDP  EGEAIAWH+ EMLQQQDALH  +T+ARVVF+E+TE S+K ALQ+PR I+++LVH+
Sbjct: 367  SDPDREGEAIAWHIIEMLQQQDALHQGVTVARVVFHEITEQSIKNALQAPREIDLNLVHA 426

Query: 942  YLSRRALDYLIAYILTPLLDKKLPGCLSAGRVEHTALSLLCDAETQIDEFKPREYWTVEV 1121
            YL+RRALDYLI + ++PLL +KLPGC SAGRV+  ALSL+CD E +IDEF P+EYWT++V
Sbjct: 427  YLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIDEFTPQEYWTIDV 486

Query: 1122 EFSNKIVDSLKKNFSIKSHLINARSKQLEQLS----TKATDIQKKITSSCFKVAGCKRT 1286
            E     +  ++   S+ + L +    +L QLS    T+A DI++KI  + F VAG K +
Sbjct: 487  E-----LYIMETGSSVNARLTHFDFNKLNQLSVRSHTEARDIEQKINVASFLVAGAKES 540