BLASTX nr result

ID: Papaver22_contig00023282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023282
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32173.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...    62   6e-08
ref|XP_002313471.1| bromodomain protein [Populus trichocarpa] gi...    57   2e-06
ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi...    55   8e-06

>emb|CBI32173.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -1

Query: 408 PPKLQQSTPPIPKPDLELSDSLLPKSKSVGVIFACRKRSSISAKAGN-SAKPVEFKGSDQ 232
           PP  +    P PKP+LE SDSLL K KS   I  CRKRSSISAKA +   K  E +  ++
Sbjct: 346 PPAPEHLLLPQPKPELERSDSLLAKQKSSAPIIVCRKRSSISAKASSFGVKAGESRSEEK 405

Query: 231 KIVEEKPVLDKKQKENSSVVEEQI---VFSKRKGQRSVSG 121
             V+ KP + ++Q    +  +E+    V S R+G ++ SG
Sbjct: 406 PAVDIKPSVREEQSLVKAGTKEKSTTGVRSLRRGGKNRSG 445


>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
           gi|147768907|emb|CAN75881.1| hypothetical protein
           VITISV_024454 [Vitis vinifera]
          Length = 686

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -1

Query: 408 PPKLQQSTPPIPKPDLELSDSLLPKSKSVGVIFACRKRSSISAKAGN-SAKPVEFKGSDQ 232
           PP  +    P PKP+LE SDSLL K KS   I  CRKRSSISAKA +   K  E +  ++
Sbjct: 438 PPAPEHLLLPQPKPELERSDSLLAKQKSSAPIIVCRKRSSISAKASSFGVKAGESRSEEK 497

Query: 231 KIVEEKPVLDKKQKENSSVVEEQI---VFSKRKGQRSVSG 121
             V+ KP + ++Q    +  +E+    V S R+G ++ SG
Sbjct: 498 PAVDIKPSVREEQSLVKAGTKEKSTTGVRSLRRGGKNRSG 537


>ref|XP_002313471.1| bromodomain protein [Populus trichocarpa]
           gi|222849879|gb|EEE87426.1| bromodomain protein [Populus
           trichocarpa]
          Length = 632

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/92 (36%), Positives = 53/92 (57%)
 Frame = -1

Query: 399 LQQSTPPIPKPDLELSDSLLPKSKSVGVIFACRKRSSISAKAGNSAKPVEFKGSDQKIVE 220
           + ++ PP PK +LE SDSLL K KS   +  CRKRSSIS K  +S+   + +   Q+  E
Sbjct: 408 MPENIPPQPKSELERSDSLLAKHKSSIPVIVCRKRSSISVKPSSSSLGQKIEQQQQQSNE 467

Query: 219 EKPVLDKKQKENSSVVEEQIVFSKRKGQRSVS 124
            K  L KK+ +   V   +   S R+G+++++
Sbjct: 468 NKSGLLKKKSDEKPVTGAR---STRRGKKNLA 496


>ref|XP_002330891.1| bromodomain protein [Populus trichocarpa]
           gi|222872713|gb|EEF09844.1| bromodomain protein [Populus
           trichocarpa]
          Length = 643

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = -1

Query: 393 QSTPPIPKPDLELSDSLLPKSKSVGVIFACRKRSSISAKAGNSAKPVEFKGSDQKIVEEK 214
           ++ P  PK +LE SDSLL K KS   I  CRKRSSISAK  +S+   + +   Q+  E K
Sbjct: 399 ENIPSQPKRELERSDSLLAKHKSSIPIIVCRKRSSISAKPSSSSLGPKIEQQQQQSNENK 458

Query: 213 PVLDKK 196
           PV D K
Sbjct: 459 PVNDLK 464


Top