BLASTX nr result

ID: Papaver22_contig00023238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023238
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    77   3e-12
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    75   7e-12
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002518070.1| conserved hypothetical protein [Ricinus comm...    63   4e-08

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/110 (44%), Positives = 64/110 (58%)
 Frame = +2

Query: 239 SAVSIVANNTDILSEILLRLPPKSLAVSKSVSKQWLFIISEPLFVQNYCLRKLLSVEGLF 418
           S+  IVA+N D+LSE+LLRLP KSL   KSVSK WL +I++P F +   L+         
Sbjct: 12  SSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLK--------- 62

Query: 419 LTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFC 568
                + V+    ++ LD   T SAP  +LTFV+    I I QSCNGLFC
Sbjct: 63  ----PNPVSALFSFVPLDPLQT-SAPFTSLTFVDHPRGIEILQSCNGLFC 107


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 41/110 (37%), Positives = 59/110 (53%)
 Frame = +2

Query: 239 SAVSIVANNTDILSEILLRLPPKSLAVSKSVSKQWLFIISEPLFVQNYCLRKLLSVEGLF 418
           S+   VA N D+L+EI LR P K L   +SVSK+WL +IS+P F   +  R   SV G+ 
Sbjct: 27  SSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVL 86

Query: 419 LTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFC 568
           L       N   ++I  D K     P+++L F+     +++ Q CNGL C
Sbjct: 87  L----GLPNSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLC 132


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
 Frame = +2

Query: 251 IVANNTDILSEILLRLPPKSLAVSKSVSKQWLFIISEPLFVQNYCLRK-LLSVEGLFLTK 427
           ++ +  DI+ EIL RLP KSL +SK V + W  +IS+P+F+ NY  R     V G FL K
Sbjct: 31  MIMDEKDIMIEILHRLPLKSLLISKCVCRLWNHLISDPIFISNYSRRNPQHHVSGFFLQK 90

Query: 428 -CSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGL 562
                   ++E+I  +G+  ++AP  +L F+     + I+ SCNGL
Sbjct: 91  FLFLEQYSKLEFITCEGQ-DDAAPEPSLCFIEDDQGVCIQHSCNGL 135


>ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
 Frame = +2

Query: 236 LSAVSIVANNTDILSEILLRLPPKSLAVSKSVSKQWLFIISEPLF-VQNYCLRKLL--SV 406
           LS+  I+A+N D+L+EIL+R+P K L   KSVSKQWL +IS+P F + + C +++L  + 
Sbjct: 6   LSSAEIIASNQDLLTEILIRIPAKPLLKFKSVSKQWLSLISDPKFCIWHACHQRVLNPTP 65

Query: 407 EGLFLTKCSSGVNQEIEYIVLDGKVTES-APVKTLTFVNVQAS--IRIEQSCNGL 562
             L L    S      ++I L G  + S +      ++NV  +  ++I+ SCNGL
Sbjct: 66  NALLLNNFYSS-TPTFQFIPLIGDDSSSYSQAAVFDYLNVSPNYRLKIKNSCNGL 119


>ref|XP_002518070.1| conserved hypothetical protein [Ricinus communis]
           gi|223542666|gb|EEF44203.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
 Frame = +2

Query: 239 SAVSIVANNTDILSEILLRLPPKSLAVSKSVSKQWLFIISEPLFVQNYCLRKLLS----- 403
           S+   VAN+ DIL+EILLRLP   L   K VSKQWL +IS+P+F   +    LL+     
Sbjct: 5   SSAETVANSVDILAEILLRLPITRLLRFKLVSKQWLSLISDPIFSLYHTRSHLLNSSSAI 64

Query: 404 VEGLFLTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGL 562
              LFL   SS   Q     + D  V    P      +N  A +RI+QSC+GL
Sbjct: 65  PSALFLHNPSSLARQTQLLSLTDVPVPSKLP-----NMNSGAPVRIKQSCSGL 112


Top