BLASTX nr result

ID: Papaver22_contig00023036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023036
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]         235   3e-60
gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre...   230   1e-58
ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   225   4e-57
ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   225   4e-57

>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
          Length = 501

 Score =  235 bits (600), Expect = 3e-60
 Identities = 117/167 (70%), Positives = 141/167 (84%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499 QPTSSTSAEKDPELNIASLKIDEKKNTEKFLDEPEEANIKAVT-GDTLYSTAATFEDLKL 323
           +P++ +  +  PEL + +LKIDE K   KFLDEPE++NIKAVT G+T Y++A TFE+L L
Sbjct: 44  EPSALSEDKGAPELGVENLKIDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNL 103

Query: 322 SEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVNV 143
           S E+LKGLYV+MKF +PSKIQ++SLPMILTPP+ DLIAQAHNGSGKTTCF LGMLSRV+ 
Sbjct: 104 SPELLKGLYVEMKFEKPSKIQAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDP 163

Query: 142 KLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRARDI 2
            LKAPQALCICPTRELAIQN+EVL KMGK+TGITS CAIP+D +  I
Sbjct: 164 NLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAIPMDSSNYI 210


>gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var.
           glandulosa]
          Length = 492

 Score =  230 bits (587), Expect = 1e-58
 Identities = 112/159 (70%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
 Frame = -3

Query: 490 SSTSAEKDPELNIASLKIDEKKNTEKFLDEPEEANIKAVT-GDTLYSTAATFEDLKLSEE 314
           S+T  +   ELN+ +L IDE     KFLDEPE++ I+AVT GDT Y++A+TFEDL LS E
Sbjct: 39  SATEEKAVSELNVDALAIDENTKVNKFLDEPEDSRIQAVTTGDTPYTSASTFEDLNLSPE 98

Query: 313 ILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVNVKLK 134
           +LKGLYV+MKF +PSKIQ++SLPMI+TPPYKDLIAQAHNGSGKTTCFVLGMLSRV+ +L+
Sbjct: 99  LLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPQLQ 158

Query: 133 APQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVD 17
            PQALCICPTREL+IQN+EVL KMGKYTGI+S CA+P++
Sbjct: 159 RPQALCICPTRELSIQNMEVLRKMGKYTGISSECAVPIE 197


>ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|222833592|gb|EEE72069.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  229 bits (585), Expect = 2e-58
 Identities = 112/159 (70%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
 Frame = -3

Query: 490 SSTSAEKDPELNIASLKIDEKKNTEKFLDEPEEANIKAVT-GDTLYSTAATFEDLKLSEE 314
           S+T  +   ELN+ +L IDE     KFLDEPE++ I+AVT GDT Y++A+TFEDL LS E
Sbjct: 39  SATEEKAVLELNVDALAIDENTKVNKFLDEPEDSRIQAVTTGDTPYTSASTFEDLNLSPE 98

Query: 313 ILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVNVKLK 134
           +LKGLYV+MKF +PSKIQ++SLPMI+TPPYKDLIAQAHNGSGKTTCFVLGMLSRV+ K +
Sbjct: 99  LLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPKQQ 158

Query: 133 APQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVD 17
           +PQALCICPTREL+IQN+EVL KMGKYTGI+S CA+P++
Sbjct: 159 SPQALCICPTRELSIQNMEVLQKMGKYTGISSECAVPIE 197


>ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
           sativus]
          Length = 508

 Score =  225 bits (573), Expect = 4e-57
 Identities = 121/182 (66%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
 Frame = -3

Query: 544 KRAWXXXXXXXXXXEQPTSSTSAEKDPELNIASLKIDEKKNTEKFLDEPEEANIKAVT-G 368
           KRAW             +SS  +E      + SLKI +  N    L+EP ++NI AVT G
Sbjct: 37  KRAWGDEEDDDVVESGDSSSAPSEY-----LESLKIQDDTN----LEEPIDSNITAVTTG 87

Query: 367 DTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSG 188
           DT YS+A+TFEDL LS+E+LKGLYV+MKF +PSKIQ++SLPMILTPPYKDLIAQAHNGSG
Sbjct: 88  DTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSG 147

Query: 187 KTTCFVLGMLSRVNVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRAR 8
           KTTCFVLGMLSRV+V LKAPQA CICPTRELA+QNIEVL KMGKYTGITS CA+P D A 
Sbjct: 148 KTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN 207

Query: 7   DI 2
            I
Sbjct: 208 YI 209


>ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
           sativus]
          Length = 508

 Score =  225 bits (573), Expect = 4e-57
 Identities = 121/182 (66%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
 Frame = -3

Query: 544 KRAWXXXXXXXXXXEQPTSSTSAEKDPELNIASLKIDEKKNTEKFLDEPEEANIKAVT-G 368
           KRAW             +SS  +E      + SLKI +  N    L+EP ++NI AVT G
Sbjct: 37  KRAWGDEEDDDVVESGDSSSAPSEY-----LESLKIQDDTN----LEEPIDSNITAVTTG 87

Query: 367 DTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSG 188
           DT YS+A+TFEDL LS+E+LKGLYV+MKF +PSKIQ++SLPMILTPPYKDLIAQAHNGSG
Sbjct: 88  DTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSG 147

Query: 187 KTTCFVLGMLSRVNVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRAR 8
           KTTCFVLGMLSRV+V LKAPQA CICPTRELA+QNIEVL KMGKYTGITS CA+P D A 
Sbjct: 148 KTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN 207

Query: 7   DI 2
            I
Sbjct: 208 YI 209


Top