BLASTX nr result

ID: Papaver22_contig00022953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022953
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding...   101   3e-19
ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   101   3e-19
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              101   3e-19
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...   100   6e-19

>sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding protein subunit beta,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           beta; AltName: Full=CPN-60 beta; Flags: Precursor
           gi|806808|gb|AAA66365.1| chaperonin precursor [Pisum
           sativum]
          Length = 595

 Score =  101 bits (251), Expect = 3e-19
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = +2

Query: 2   AEALLKVGRQGVVTIEQGKATANTMEIVEGMQFDRGYLSEYFVTDRRKRTVEFQDCKVLL 181
           AEAL KVGR+GVVT+E+GK+  N++ +VEGMQFDRGY+S YFVTD  K TVEF++CK+LL
Sbjct: 211 AEALSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMTVEFENCKLLL 270

Query: 182 VDKNIVYSREL 214
           VDK I  +R+L
Sbjct: 271 VDKKITNARDL 281



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 220 AIIQVGAQTVVELKDKQLRIEDALNATKAAIEEXXXXXXXCCML 351
           A+IQVGAQT  ELK+K+LR+EDALNATKAA+EE       C +L
Sbjct: 425 AVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLL 468


>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  101 bits (251), Expect = 3e-19
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = +2

Query: 2   AEALLKVGRQGVVTIEQGKATANTMEIVEGMQFDRGYLSEYFVTDRRKRTVEFQDCKVLL 181
           ++A+ +VGR+GV+TIE+GK   N+++IVEGMQFDRGYLS YFVTDR+K  VEF DCK+LL
Sbjct: 189 SDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLL 248

Query: 182 VDKNIVYSRELF 217
           VDK I   +E+F
Sbjct: 249 VDKKITNPKEMF 260



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = +1

Query: 220 AIIQVGAQTVVELKDKQLRIEDALNATKAAIEEXXXXXXXCCMLVTWTKLYG 375
           AI+QVGAQT VELKDKQLRIEDA+NATKAAIEE       C +L    K+ G
Sbjct: 403 AILQVGAQTQVELKDKQLRIEDAVNATKAAIEEGVVVGGGCSLLRLSLKVDG 454


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  101 bits (251), Expect = 3e-19
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = +2

Query: 2   AEALLKVGRQGVVTIEQGKATANTMEIVEGMQFDRGYLSEYFVTDRRKRTVEFQDCKVLL 181
           ++A+ +VGR+GV+TIE+GK   N+++IVEGMQFDRGYLS YFVTDR+K  VEF DCK+LL
Sbjct: 163 SDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLL 222

Query: 182 VDKNIVYSRELF 217
           VDK I   +E+F
Sbjct: 223 VDKKITNPKEMF 234



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = +1

Query: 220 AIIQVGAQTVVELKDKQLRIEDALNATKAAIEEXXXXXXXCCMLVTWTKLYG 375
           AI+QVGAQT VELKDKQLRIEDA+NATKAAIEE       C +L    K+ G
Sbjct: 377 AILQVGAQTQVELKDKQLRIEDAVNATKAAIEEGVVVGGGCSLLRLSLKVDG 428


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  100 bits (249), Expect = 5e-19
 Identities = 47/72 (65%), Positives = 61/72 (84%)
 Frame = +2

Query: 2   AEALLKVGRQGVVTIEQGKATANTMEIVEGMQFDRGYLSEYFVTDRRKRTVEFQDCKVLL 181
           ++AL +VGR+GVVTIE+G+ T N +EIVEGMQFDRGYLS YFVTDR++  VEF +CK+LL
Sbjct: 141 SDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDRQRMVVEFHNCKLLL 200

Query: 182 VDKNIVYSRELF 217
           VDK I  ++E+F
Sbjct: 201 VDKKIQNAKEVF 212



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = +1

Query: 220 AIIQVGAQTVVELKDKQLRIEDALNATKAAIEEXXXXXXXCCMLVTWTKLYGAL 381
           AI+QVGAQT VELKDK LRIEDALNATKAAIEE       C +L   TKL+  L
Sbjct: 355 AILQVGAQTQVELKDKLLRIEDALNATKAAIEEGVVVGGGCSLLRLSTKLFQLL 408


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  100 bits (248), Expect = 6e-19
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = +2

Query: 2   AEALLKVGRQGVVTIEQGKATANTMEIVEGMQFDRGYLSEYFVTDRRKRTVEFQDCKVLL 181
           +EAL KVGR GVVTIE G++T N +EIVEGMQFDRGYLS YFV +RRK TVE  +CK+LL
Sbjct: 193 SEALHKVGRMGVVTIETGRSTENCLEIVEGMQFDRGYLSPYFVNNRRKMTVELHNCKLLL 252

Query: 182 VDKNIVYSREL 214
           VDK I  ++EL
Sbjct: 253 VDKKITKTKEL 263



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 37/76 (48%), Positives = 48/76 (63%)
 Frame = +1

Query: 148 DSGISGLQGTLGRQKHCVLEGVVSAIIQVGAQTVVELKDKQLRIEDALNATKAAIEEXXX 327
           ++ +   Q  +  ++   L G + AI+QVGAQT VELKDKQLR+EDALNATKAAIEE   
Sbjct: 384 ENTVENFQKNILNERIARLSGGI-AILQVGAQTQVELKDKQLRVEDALNATKAAIEEGVV 442

Query: 328 XXXXCCMLVTWTKLYG 375
               C +L    K+ G
Sbjct: 443 VGGGCSLLRLSQKVDG 458


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