BLASTX nr result

ID: Papaver22_contig00022902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022902
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     89   1e-15
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     89   1e-15
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    87   5e-15
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    84   4e-14
ref|NP_196378.1| F-box protein [Arabidopsis thaliana] gi|7526267...    82   9e-14

>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
 Frame = +2

Query: 134 MISNSRKVRPKPSGDDSGNNTSITGPHSSLIVDNVDIIAQILVRLPVKYLLRSKSVSKTW 313
           M S SR     P    S  N   +   ++++ D  D++ QIL  LP+K LLR K VSK W
Sbjct: 1   MSSCSRTRTKAPRSARSHRNGGFSSSSATIVADIDDVLIQILSFLPIKTLLRFKRVSKRW 60

Query: 314 LSVVIAPSFVRNYSVRNRH--SVSGLFLNQEG--KYEFIPLDKQNGTXXXXXXXXXXXXX 481
           LS++  P F  N  +++ H   +SG FL+     KY F+ LD                  
Sbjct: 61  LSLITNPDF-SNRIIKSNHPLPISGFFLHSPRAIKYSFVSLD------------------ 101

Query: 482 NDNDNSNVTRDFSFETLKFLNVPGCIKIEQSCNGLLCCSYSAPSGRRYPDLTAYYIYNPS 661
            D D++   R  S   L F +    + I QS NGLL C  S  S   +   T YY+YNP+
Sbjct: 102 -DEDDATNQRISSSLPLWFTDHQSDMIIMQSTNGLLLCKCSCASSNHFN--TNYYVYNPT 158

Query: 662 TKSYKIVPE 688
           TK Y ++P+
Sbjct: 159 TKQYTLLPQ 167


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
 Frame = +2

Query: 134 MISNSRKVRPKPSGDDSGNNTSITGPHSSLIVDNVDIIAQILVRLPVKYLLRSKSVSKTW 313
           M S SR     P    S  N   +   ++++ D  DI+ QIL  LP+K LLR K VSK W
Sbjct: 1   MSSCSRTRTKAPRSARSRRNGGFSSSSATIVADIDDILIQILSLLPIKTLLRFKRVSKRW 60

Query: 314 LSVVIAPSFVRNYSVRNRH--SVSGLFLN--QEGKYEFIPLDKQNGTXXXXXXXXXXXXX 481
           LS++  P F  N  +++ H   +SG FL+  +  KY F+ LD                  
Sbjct: 61  LSLITNPDF-SNRVIKSNHPLPISGFFLHSPRAFKYSFVSLD------------------ 101

Query: 482 NDNDNSNVTRDFSFETLKFLNVPGCIKIEQSCNGLLCCSYSAPSGRRYPDLTAYYIYNPS 661
            D D++   R  S   L F +    + I QS NGLL C  S  S   +   T YY+YNP+
Sbjct: 102 -DEDDATNQRVSSSLPLWFTDHQTDMIIMQSTNGLLLCKCSCASSNHFN--TNYYVYNPT 158

Query: 662 TKSYKIVPE 688
           TK Y ++P+
Sbjct: 159 TKQYTLLPQ 167


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
 Frame = +2

Query: 134 MISNSRKVRPKPSGDDSGNNTSITGPHSSLIVDNVDIIAQILVRLPVKYLLRSKSVSKTW 313
           M S SR     P    S  N   +   ++++ +  D++ QIL  LP+K LLR K VSK W
Sbjct: 1   MSSCSRTRTKAPRSARSNRNGGFSSSSATIVANIDDVLIQILSFLPIKTLLRFKRVSKRW 60

Query: 314 LSVVIAPSFVRNYSVRNRH--SVSGLFLNQEG--KYEFIPLDKQNGTXXXXXXXXXXXXX 481
           LS++  P F  N  +++ H   +SG FL+     KY F+ LD                  
Sbjct: 61  LSLITNPDF-SNRIIKSNHPLPISGFFLHSPRAIKYSFVSLD------------------ 101

Query: 482 NDNDNSNVTRDFSFETLKFLNVPGCIKIEQSCNGLLCCSYSAPSGRRYPDLTAYYIYNPS 661
            D D++   R  S   L F +    + I QS NGLL C  S  S   +   T YY+YNP+
Sbjct: 102 -DEDDATNQRISSSLPLWFTDHQTDMIIMQSTNGLLLCQCSCASSNHFN--TNYYVYNPT 158

Query: 662 TKSYKIVPE 688
           TK Y ++P+
Sbjct: 159 TKQYTLLPQ 167


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
 Frame = +2

Query: 215 SSLIVDNVDIIAQILVRLPVKYLLRSKSVSKTWLSVVIAPSFVRNYSVRN-RHSVSGLFL 391
           + +I  N D+I QIL+RLPVK LLR KSVSK WLS++  P F   +++RN  H++S LFL
Sbjct: 7   AEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFL 66

Query: 392 -NQEGKYEFIPLDKQNGTXXXXXXXXXXXXXNDNDNSNVTRDFSFETLKFLNVPGCIKIE 568
            N   +++F+ L                   + + +S+     SF+          IKI 
Sbjct: 67  RNSPLEFKFLSLSS-----------------SSSSSSSSASPLSFDLFH------GIKIL 103

Query: 569 QSCNGLLCCSYSAPSGRRYPDLTAYYIYNPSTKSYKIVP 685
           QSCNGLL CS     G++      YYI NP+TK    +P
Sbjct: 104 QSCNGLLLCSTLPKIGQK----RNYYISNPTTKQMFTLP 138


>ref|NP_196378.1| F-box protein [Arabidopsis thaliana]
           gi|75262676|sp|Q9FLS0.1|FB253_ARATH RecName: Full=F-box
           protein At5g07610 gi|9759582|dbj|BAB11439.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332003802|gb|AED91185.1| F-box protein [Arabidopsis
           thaliana]
          Length = 420

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 63/187 (33%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
 Frame = +2

Query: 134 MISNSRKVRPKPSGDDSGNNTSITGPHSSLIVDNVDIIAQILVRLPVKYLLRSKSVSKTW 313
           M S SR     P    S  N   +   ++++ D  D++ QIL  LP+K LLR K VSK W
Sbjct: 1   MSSCSRTRTKAPRSARSRRNGGFSSSSATIVADIDDVLIQILSFLPIKTLLRFKRVSKRW 60

Query: 314 LSVVIAPSFVRNYSVRNRH--SVSGLFLN--QEGKYEFIPLDKQNGTXXXXXXXXXXXXX 481
           LS++  P F  N  +++ H   +SG FL+  +E KY F+ LD                  
Sbjct: 61  LSLITNPVF-SNRVIKSNHPLPISGFFLHSPREIKYSFVSLD------------------ 101

Query: 482 NDNDNSNVTRDFSFETLKFLNVPGCIKIEQSCNGLLCCSYSAPSGRRYPDLTAYYIYNPS 661
              D++   R  S   L F +    + I QS NGLL C  S  S   +   T YY+YNP+
Sbjct: 102 ---DDATNQRISSSLPLWFTDHQTDMIIMQSTNGLLLCKCSCASSNHFN--TNYYVYNPT 156

Query: 662 TKSYKIV 682
           TK Y ++
Sbjct: 157 TKQYTLL 163


Top